evm.TU.supercontig_13.181 (Carica papaya)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 evm.TU.supercontig_13.181 T244785_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.719 0.719
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_13.181 Leafy 1 159
evm.model.supercontig_13.181 Leafy 146 322

Links

Other Leafy family TFs
Other Carica papaya TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LFY Arabidopsis thaliana AT5G61850 D 0.719
cassava19992.m1 Manihot esculenta cassava19992.m1 I 0.729
Thhalv10005606m.g Eutrema salsugineum Thhalv10005606m.g I 0.719
cassava40548.m1 Manihot esculenta cassava40548.m1 I 0.754
Cucsa.156880 Cucumis sativus Cucsa.156880 I 0.749
mgf013601m Mimulus guttatus mgf013601m I 0.759
Bostr.26833s0050 Boechera stricta Bostr.26833s0050 I 0.714
Cagra.4553s0022 Capsella grandiflora Cagra.4553s0022 I 0.714
Carubv10028602m.g Capsella rubella Carubv10028602m.g I 0.714
Ciclev10033942m.g Citrus clementina Ciclev10033942m.g I 0.754
Eucgr.K02192 Eucalyptus grandis Eucgr.K02192 I 0.704
Gorai.001G053900 Gossypium raimondii Gorai.001G053900 I 0.764
Lus10016732.g Linum usitatissimum Lus10016732.g I 0.714
Lus10022427.g Linum usitatissimum Lus10022427.g I 0.724
orange1.1g044766m.g Citrus sinensis orange1.1g044766m.g I 0.754
SapurV1A.2394s0010 Salix purpurea SapurV1A.2394s0010 I 0.749
LFY Arabidopsis lyrata Al_scaffold_0008_2690 I 0.719
30147.m014401 Ricinus communis 30147.m014401 I 0.773
Pm024610 Prunus mume Pm024610 I 0.783
Cla019619 Citrullus lanatus Cla019619 I 0.759
Ca_01386 Cicer arietinum Ca_01386 I 0.754
LFY Vitis vinifera VIT_17s0000g00150 I 0.754
TCM_014768 Theobroma cacao TCM_014768 I 0.764
Solyc03g118160.1 Solanum lycopersicum Solyc03g118160.1 I 0.764
PRUPE_ppa006372mg Prunus persica PRUPE_ppa006372mg I 0.729
FL Populus trichocarpa POPTR_0015s11820 I 0.744
MTR_3g098560 Medicago truncatula MTR_3g098560 I 0.744
GLYMA06G17170 Glycine max GLYMA06G17170 I 0.744
Bra029305 Brassica rapa Bra029305 I 0.714
Bra019619 Brassica rapa Bra019619 I 0.709
Bo3g109270 Brassica oleracea Bo3g109270 I 0.714
Bo2g161690 Brassica oleracea Bo2g161690 I 0.714