CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0736s0021
(
Capsella grandiflora
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Cagra.0736s0021
T246713_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0736s0021.1.p
LOB
102
200
ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNVHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQSDARANDPVDGCYGIIRKLQYQIEYTRNELEIVLQ
Cagra.0736s0021.2.p
LOB
102
200
ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNVHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQSDARANDPVDGCYGIIRKLQYQIEYTRNELEIVLQ
Links
Other
LOB
family TFs
Other
Capsella grandiflora
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_10833
Chaetomium globosum
CHGG_10833
N
GGTG_03177
Gaeumannomyces graminis
GGTG_03177
N
OIDMADRAFT_172967
Oidiodendron maius
OIDMADRAFT_172967
N
TSTA_059940
Talaromyces stipitatus
TSTA_059940
N
V499_01344
Pseudogymnoascus pannorum
V499_01344
N
V499_07279
Pseudogymnoascus pannorum
V499_07279
N