Cagra.0736s0021 (Capsella grandiflora)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cagra.0736s0021 T246713_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0736s0021.1.p LOB 102 200
Cagra.0736s0021.2.p LOB 102 200

Links

Other LOB family TFs
Other Capsella grandiflora TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10014142m.g Capsella rubella Carubv10014142m.g N 0.990
LBD22 Arabidopsis thaliana AT3G13850 N 0.980
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N 0.980
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N 0.980
Thhalv10021306m.g Eutrema salsugineum Thhalv10021306m.g N 0.919
Bo1g134830 Brassica oleracea Bo1g134830 N 0.869
Bra021513 Brassica rapa Bra021513 N 0.869
Bo5g132010 Brassica oleracea Bo5g132010 N 0.859
TCM_029052 Theobroma cacao TCM_029052 N 0.808
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N 0.800
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N 0.798
POPTR_0003s04520 Populus trichocarpa POPTR_0003s04520 N 0.798
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N 0.798
Cla015827 Citrullus lanatus Cla015827 N 0.788
28694.m000665 Ricinus communis 28694.m000665 N 0.788
cassava34925.m1 Manihot esculenta cassava34925.m1 N 0.788
cassava34926.m1 Manihot esculenta cassava34926.m1 N 0.788
Cucsa.360530 Cucumis sativus Cucsa.360530 N 0.788
GLYMA07G01170 Glycine max GLYMA07G01170 N 0.778
cassava2716.m1 Manihot esculenta cassava2716.m1 N 0.778
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N 0.778
GLYMA08G20550 Glycine max GLYMA08G20550 N 0.768
MTR_8g017090 Medicago truncatula MTR_8g017090 N 0.768
MDP0000257227 Malus domestica MDP0000257227 N 0.768
PGSC0003DMG400004880 Solanum tuberosum PGSC0003DMG400004880 N 0.758
Ca_10077 Cicer arietinum Ca_10077 N 0.758
Pm013344 Prunus mume Pm013344 N 0.758
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N 0.758
chr3.CM0049.30.nd Lotus japonicus chr3.CM0049.30.nd N 0.758
TCM_029050 Theobroma cacao TCM_029050 N 0.747
mgf019664m Mimulus guttatus mgf019664m N 0.737
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N 0.717
Lus10003789.g Linum usitatissimum Lus10003789.g N 0.707