Pm013344 (Prunus mume)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pm013344 T246372_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm013344 LOB 90 188

Links

Other LOB family TFs
Other Prunus mume TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava2716.m1 Manihot esculenta cassava2716.m1 N 0.909
MDP0000257227 Malus domestica MDP0000257227 N 0.909
cassava34925.m1 Manihot esculenta cassava34925.m1 N 0.899
cassava34926.m1 Manihot esculenta cassava34926.m1 N 0.899
28694.m000665 Ricinus communis 28694.m000665 N 0.889
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N 0.889
Cucsa.360530 Cucumis sativus Cucsa.360530 N 0.879
Cla015827 Citrullus lanatus Cla015827 N 0.869
PGSC0003DMG400004880 Solanum tuberosum PGSC0003DMG400004880 N 0.859
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N 0.859
POPTR_0003s04520 Populus trichocarpa POPTR_0003s04520 N 0.859
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N 0.848
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N 0.848
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N 0.843
TCM_029052 Theobroma cacao TCM_029052 N 0.838
GLYMA07G01170 Glycine max GLYMA07G01170 N 0.808
TCM_029050 Theobroma cacao TCM_029050 N 0.798
GLYMA08G20550 Glycine max GLYMA08G20550 N 0.788
MTR_8g017090 Medicago truncatula MTR_8g017090 N 0.788
Ca_10077 Cicer arietinum Ca_10077 N 0.788
mgf019664m Mimulus guttatus mgf019664m N 0.778
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N 0.778
Lus10003789.g Linum usitatissimum Lus10003789.g N 0.778
chr3.CM0049.30.nd Lotus japonicus chr3.CM0049.30.nd N 0.778
Bo1g134830 Brassica oleracea Bo1g134830 N 0.768
Bo5g132010 Brassica oleracea Bo5g132010 N 0.768
Bra021513 Brassica rapa Bra021513 N 0.768
Carubv10014142m.g Capsella rubella Carubv10014142m.g N 0.768
LBD22 Arabidopsis thaliana AT3G13850 N 0.758
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N 0.758
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N 0.758
Cagra.0736s0021 Capsella grandiflora Cagra.0736s0021 N 0.758
Lus10002513.g Linum usitatissimum Lus10002513.g N 0.758
Bra027392 Brassica rapa Bra027392 N 0.738
Thhalv10021306m.g Eutrema salsugineum Thhalv10021306m.g N 0.737