chr3.CM0049.30.nd (Lotus japonicus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 chr3.CM0049.30.nd T247417_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0049.30.nd LOB 38 136

Links

Other LOB family TFs
Other Lotus japonicus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_10077 Cicer arietinum Ca_10077 N 0.919
MTR_8g017090 Medicago truncatula MTR_8g017090 N 0.909
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N 0.871
GLYMA07G01170 Glycine max GLYMA07G01170 N 0.869
GLYMA08G20550 Glycine max GLYMA08G20550 N 0.869
cassava34925.m1 Manihot esculenta cassava34925.m1 N 0.838
cassava34926.m1 Manihot esculenta cassava34926.m1 N 0.838
TCM_029052 Theobroma cacao TCM_029052 N 0.828
cassava2716.m1 Manihot esculenta cassava2716.m1 N 0.828
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N 0.828
28694.m000665 Ricinus communis 28694.m000665 N 0.818
MDP0000257227 Malus domestica MDP0000257227 N 0.818
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N 0.808
POPTR_0003s04520 Populus trichocarpa POPTR_0003s04520 N 0.808
Cla015827 Citrullus lanatus Cla015827 N 0.808
Cucsa.360530 Cucumis sativus Cucsa.360530 N 0.808
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N 0.808
PGSC0003DMG400004880 Solanum tuberosum PGSC0003DMG400004880 N 0.788
TCM_029050 Theobroma cacao TCM_029050 N 0.778
Pm013344 Prunus mume Pm013344 N 0.778
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N 0.778
LBD22 Arabidopsis thaliana AT3G13850 N 0.768
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N 0.768
Carubv10014142m.g Capsella rubella Carubv10014142m.g N 0.768
Bo1g134830 Brassica oleracea Bo1g134830 N 0.758
Bra021513 Brassica rapa Bra021513 N 0.758
mgf019664m Mimulus guttatus mgf019664m N 0.758
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N 0.758
Cagra.0736s0021 Capsella grandiflora Cagra.0736s0021 N 0.758
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N 0.758
Bo5g132010 Brassica oleracea Bo5g132010 N 0.737
Lus10003789.g Linum usitatissimum Lus10003789.g N 0.737
Thhalv10021306m.g Eutrema salsugineum Thhalv10021306m.g N 0.737
Lus10002513.g Linum usitatissimum Lus10002513.g N 0.717