MDP0000257227 (Malus domestica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 MDP0000257227 T247101_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000257227 LOB 31 129

Links

Other LOB family TFs
Other Malus domestica TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava34925.m1 Manihot esculenta cassava34925.m1 N 0.919
cassava34926.m1 Manihot esculenta cassava34926.m1 N 0.919
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N 0.914
Pm013344 Prunus mume Pm013344 N 0.909
cassava2716.m1 Manihot esculenta cassava2716.m1 N 0.909
28694.m000665 Ricinus communis 28694.m000665 N 0.899
PGSC0003DMG400004880 Solanum tuberosum PGSC0003DMG400004880 N 0.889
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N 0.869
Cucsa.360530 Cucumis sativus Cucsa.360530 N 0.869
POPTR_0003s04520 Populus trichocarpa POPTR_0003s04520 N 0.859
Cla015827 Citrullus lanatus Cla015827 N 0.859
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N 0.848
TCM_029052 Theobroma cacao TCM_029052 N 0.838
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N 0.838
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N 0.838
TCM_029050 Theobroma cacao TCM_029050 N 0.818
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N 0.818
chr3.CM0049.30.nd Lotus japonicus chr3.CM0049.30.nd N 0.818
GLYMA07G01170 Glycine max GLYMA07G01170 N 0.808
MTR_8g017090 Medicago truncatula MTR_8g017090 N 0.808
Ca_10077 Cicer arietinum Ca_10077 N 0.808
mgf019664m Mimulus guttatus mgf019664m N 0.798
Lus10003789.g Linum usitatissimum Lus10003789.g N 0.798
GLYMA08G20550 Glycine max GLYMA08G20550 N 0.788
Bo1g134830 Brassica oleracea Bo1g134830 N 0.778
Bo5g132010 Brassica oleracea Bo5g132010 N 0.778
Bra021513 Brassica rapa Bra021513 N 0.778
Carubv10014142m.g Capsella rubella Carubv10014142m.g N 0.778
Lus10002513.g Linum usitatissimum Lus10002513.g N 0.778
LBD22 Arabidopsis thaliana AT3G13850 N 0.768
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N 0.768
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N 0.768
Cagra.0736s0021 Capsella grandiflora Cagra.0736s0021 N 0.768
Thhalv10021306m.g Eutrema salsugineum Thhalv10021306m.g N 0.758