TCM_029052 (Theobroma cacao)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 TCM_029052 T246132_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY27125 LOB 14 112

Links

Other LOB family TFs
Other Theobroma cacao TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.011G064500 Gossypium raimondii Gorai.011G064500 N 0.970
TCM_029050 Theobroma cacao TCM_029050 N 0.889
cassava2716.m1 Manihot esculenta cassava2716.m1 N 0.889
cassava34925.m1 Manihot esculenta cassava34925.m1 N 0.889
cassava34926.m1 Manihot esculenta cassava34926.m1 N 0.889
POPTR_0003s04520 Populus trichocarpa POPTR_0003s04520 N 0.879
28694.m000665 Ricinus communis 28694.m000665 N 0.879
POPTR_0001s20110 Populus trichocarpa POPTR_0001s20110 N 0.869
SapurV1A.0697s0010 Salix purpurea SapurV1A.0697s0010 N 0.869
Cla015827 Citrullus lanatus Cla015827 N 0.859
Cucsa.360530 Cucumis sativus Cucsa.360530 N 0.848
Solyc06g062630.2 Solanum lycopersicum Solyc06g062630.2 N 0.843
MTR_8g017090 Medicago truncatula MTR_8g017090 N 0.838
Ca_10077 Cicer arietinum Ca_10077 N 0.838
Pm013344 Prunus mume Pm013344 N 0.838
MDP0000257227 Malus domestica MDP0000257227 N 0.838
GLYMA07G01170 Glycine max GLYMA07G01170 N 0.828
PGSC0003DMG400004880 Solanum tuberosum PGSC0003DMG400004880 N 0.828
chr3.CM0049.30.nd Lotus japonicus chr3.CM0049.30.nd N 0.828
LBD22 Arabidopsis thaliana AT3G13850 N 0.818
Bo5g132010 Brassica oleracea Bo5g132010 N 0.818
Carubv10014142m.g Capsella rubella Carubv10014142m.g N 0.818
gene23043-v1.0-hybrid Fragaria vesca gene23043-v1.0-hybrid N 0.818
Lus10003789.g Linum usitatissimum Lus10003789.g N 0.818
Bo1g134830 Brassica oleracea Bo1g134830 N 0.808
Bra021513 Brassica rapa Bra021513 N 0.808
LBD22 Arabidopsis lyrata fgenesh2_kg.3__1489__AT3G13850.1 N 0.808
GLYMA08G20550 Glycine max GLYMA08G20550 N 0.808
Bostr.28625s0323 Boechera stricta Bostr.28625s0323 N 0.808
Cagra.0736s0021 Capsella grandiflora Cagra.0736s0021 N 0.808
evm.TU.supercontig_25.41 Carica papaya evm.TU.supercontig_25.41 N 0.808
Lus10002513.g Linum usitatissimum Lus10002513.g N 0.798
mgf019664m Mimulus guttatus mgf019664m N 0.778
Thhalv10021306m.g Eutrema salsugineum Thhalv10021306m.g N 0.778