Pavir.J15413 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.J15413 T247235_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J15413.1.p LOB 1 104

Links

Other LOB family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA02G27230 Glycine max GLYMA02G27230 I 0.710
BGIOSGA000736 Oryza indica BGIOSGA000736 N 0.828
BRADI2G51310 Brachypodium distachyon BRADI2G51310 N 0.860
GRMZM2G025758 Zea mays GRMZM2G025758 N 0.957
LPERR01G28060 Leersia perrieri LPERR01G28060 N 0.817
OBART01G32570 Oryza barthii OBART01G32570 N 0.828
OGLUM01G36730 Oryza glumaepatula OGLUM01G36730 N 0.828
OMERI01G29510 Oryza meridionalis OMERI01G29510 N 0.828
ONIVA01G36850 Oryza nivara ONIVA01G36850 N 0.828
OPUNC01G31580 Oryza punctata OPUNC01G31580 N 0.817
ORGLA07G0240800 Oryza glaberrima ORGLA07G0240800 N 0.828
ORUFI01G35770 Oryza rufipogon ORUFI01G35770 N 0.817
OS01G0772100 Oryza sativa OS01G0772100 N 0.817
Sb03g035920 Sorghum bicolor Sb03g035920 N 1.000
Si004290m.g Setaria italica Si004290m.g N 0.919
Pavir.J25219 Panicum virgatum Pavir.J25219 N 0.989