GLYMA02G27230 (Glycine max)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GLYMA02G27230 T245177_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.727 0.727
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA02G27230.1 LOB 45 144

Links

Other LOB family TFs
Other Glycine max TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA10G11031 Glycine max GLYMA10G11031 I 0.960
cassava15337.m1 Manihot esculenta cassava15337.m1 I 0.879
GLYMA19G30200 Glycine max GLYMA19G30200 I 0.879
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.869
30072.m000955 Ricinus communis 30072.m000955 I 0.869
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.869
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.859
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.859
Bra036436 Brassica rapa Bra036436 I 0.848
Carubv10015417m.g Capsella rubella Carubv10015417m.g I 0.848
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I 0.848
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I 0.848
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I 0.848
Pm028642 Prunus mume Pm028642 I 0.848
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I 0.848
LBD20 Arabidopsis thaliana AT3G03760 I 0.848
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I 0.848
TCM_025849 Theobroma cacao TCM_025849 I 0.848
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I 0.848
Bo1g153580 Brassica oleracea Bo1g153580 I 0.848
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.848
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I 0.843
Cla002965 Citrullus lanatus Cla002965 I 0.838
MDP0000322059 Malus domestica MDP0000322059 I 0.838
mgf006429m Mimulus guttatus mgf006429m I 0.838
Cucsa.338130 Cucumis sativus Cucsa.338130 I 0.828
Ca_19716 Cicer arietinum Ca_19716 I 0.828
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.818
MTR_6g027710 Medicago truncatula MTR_6g027710 I 0.818
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.818
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.818
Eucgr.K01522 Eucalyptus grandis Eucgr.K01522 I 0.818
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I 0.818
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I 0.818
chr2.LjT13P17.280.nd Lotus japonicus chr2.LjT13P17.280.nd I 0.808
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.808
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.805
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.798
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I 0.798
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.798
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.784
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I 0.782
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I 0.782
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.768
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.768
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.758
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.758
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.758
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.758
Cla007068 Citrullus lanatus Cla007068 I 0.758
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.758
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.758
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.758
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.758
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.758
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.758
Pm017936 Prunus mume Pm017936 I 0.758
30174.m008898 Ricinus communis 30174.m008898 I 0.758
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.747
OS03G0246900 Oryza sativa OS03G0246900 I 0.747
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.747
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.747
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.747
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.747
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.747
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.747
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.747
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.747
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.747
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.747
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.747
OBART03G10450 Oryza barthii OBART03G10450 I 0.747
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.747
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.747
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.747
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.747
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.747
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.747
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.747
PK23380.1 Cannabis sativa PK23380.1 I 0.746
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.744
TCM_005496 Theobroma cacao TCM_005496 I 0.739
OB10G12360 Oryza brachyantha OB10G12360 I 0.737
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.737
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.737
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I 0.737
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.737
GSMUA_Achr9G10530_001 Musa acuminata GSMUA_Achr9G10530_001 I 0.737
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.737
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.737
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.737
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.727
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.727
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.727
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.727
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.727
mgf020773m Mimulus guttatus mgf020773m I 0.727
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.727
ONIVA10G03250 Oryza nivara ONIVA10G03250 I 0.727
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I 0.727
LBD18 Arabidopsis thaliana AT2G45420 D 0.727
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.727
28428.m000040 Ricinus communis 28428.m000040 I 0.727
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I 0.727
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I 0.727
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.727
GLYMA01G34540 Glycine max GLYMA01G34540 I 0.727
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I 0.727
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.727
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.727
Bra004910 Brassica rapa Bra004910 I 0.727
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I 0.727
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.727
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.727
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.727
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.727
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I 0.727
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I 0.727
Carubv10025050m.g Capsella rubella Carubv10025050m.g I 0.727
F775_02052 Aegilops tauschii F775_02052 I 0.727
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.727
BGIOSGA032254 Oryza indica BGIOSGA032254 I 0.727
Bo4g024620 Brassica oleracea Bo4g024620 I 0.727
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.727
Sb03g035920 Sorghum bicolor Sb03g035920 N 0.727
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.727
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.727
OB03G13890 Oryza brachyantha OB03G13890 I 0.727
Si004290m.g Setaria italica Si004290m.g N 0.727
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.727
Si040019m.g Setaria italica Si040019m.g I 0.727
OPUNC10G02630 Oryza punctata OPUNC10G02630 I 0.727
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.727
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.727
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I 0.727
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I 0.727
OS03G0149100 Oryza sativa OS03G0149100 I 0.727
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I 0.727
OS10G0162600 Oryza sativa OS10G0162600 I 0.727
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.727
OBART03G03830 Oryza barthii OBART03G03830 I 0.727
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I 0.727
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.727
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.727
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.723
Pavir.J25219 Panicum virgatum Pavir.J25219 N 0.720
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.717
Pavir.Ib02517 Panicum virgatum Pavir.Ib02517 I 0.717
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.717
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I 0.717
PRUPE_ppa025889mg Prunus persica PRUPE_ppa025889mg I 0.717
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.717
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.717
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.717
TRIUR3_07751 Triticum urartu TRIUR3_07751 I 0.717
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I 0.717
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.717
PK21617.1 Cannabis sativa PK21617.1 I 0.717
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.717
Cla006087 Citrullus lanatus Cla006087 I 0.717
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.717
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I 0.717
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.717
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.717
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I 0.717
OS02G0820500 Oryza sativa OS02G0820500 I 0.717
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.717
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.717
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.717
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.717
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.717
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.717
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.717
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I 0.717
OB02G44330 Oryza brachyantha OB02G44330 I 0.717
F775_22967 Aegilops tauschii F775_22967 I 0.717
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.717
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.717
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.717
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.717
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.717
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.717
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.717
Bra040311 Brassica rapa Bra040311 I 0.717
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.717
Pavir.J15413 Panicum virgatum Pavir.J15413 N 0.710
Pm020628 Prunus mume Pm020628 I 0.707
GLYMA03G31830 Glycine max GLYMA03G31830 I 0.707
GLYMA09G40500 Glycine max GLYMA09G40500 I 0.707
LBD29 Arabidopsis thaliana AT3G58190 I 0.707
LjT35F15.90.nd Lotus japonicus LjT35F15.90.nd I 0.707
GRMZM2G025758 Zea mays GRMZM2G025758 N 0.707
MTR_8g036085 Medicago truncatula MTR_8g036085 I 0.707
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.707
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I 0.707
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.707
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.707
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.707
Bra004693 Brassica rapa Bra004693 I 0.707
Bo9g002150 Brassica oleracea Bo9g002150 I 0.707
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.707
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.707
Bra037322 Brassica rapa Bra037322 I 0.707
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.707
Bo4g195520 Brassica oleracea Bo4g195520 I 0.707
Bo4g191530 Brassica oleracea Bo4g191530 I 0.707
gene08254-v1.0-hybrid Fragaria vesca gene08254-v1.0-hybrid I 0.707
Bo4g016000 Brassica oleracea Bo4g016000 I 0.707
Si019578m.g Setaria italica Si019578m.g I 0.707
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.707
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.707
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I 0.707
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.707