SELMODRAFT_59642 (Selaginella moellendorffii)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 SELMODRAFT_59642 T246025_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.793 0.793
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.793 0.793
LBD30
M01066_2.00 		Arabidopsis thaliana
BVWWWHVNGG
CCNBDWWWBV		 PBM
Sullivan et al.(2014)
pTH7467 		0.770 0.770
LBD30
M01067_2.00 		Arabidopsis thaliana
VWWWNVNGGD
HCCNBNWWWB		 PBM
Sullivan et al.(2014)
pTH7616 		0.770 0.770
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.747 0.747
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.747 0.747
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.747 0.747
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ24749 LOB 6 93

Links

Other LOB family TFs
Other Selaginella moellendorffii TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I 1.000
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.874
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.874
LBD20 Arabidopsis thaliana AT3G03760 I 0.862
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I 0.862
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I 0.862
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I 0.862
Carubv10015417m.g Capsella rubella Carubv10015417m.g I 0.862
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.851
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.851
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.851
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.839
30072.m000955 Ricinus communis 30072.m000955 I 0.839
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.839
TCM_025849 Theobroma cacao TCM_025849 I 0.828
Cla002965 Citrullus lanatus Cla002965 I 0.828
Cla007068 Citrullus lanatus Cla007068 I 0.828
30174.m008898 Ricinus communis 30174.m008898 I 0.828
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.828
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.828
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.828
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.828
MDP0000254224 Malus domestica MDP0000254224 I 0.828
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.828
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.816
POPTR_0014s06590 Populus trichocarpa POPTR_0014s06590 I 0.816
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.816
Pm028642 Prunus mume Pm028642 I 0.816
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.816
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.816
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.816
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.816
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I 0.816
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I 0.816
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.816
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I 0.816
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.816
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.816
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.805
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.805
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.805
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.805
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.805
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.805
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.805
OBART03G10450 Oryza barthii OBART03G10450 I 0.805
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.805
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.805
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.805
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.805
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.805
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.805
OS03G0246900 Oryza sativa OS03G0246900 I 0.805
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.805
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.805
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.805
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.805
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.805
evm.TU.supercontig_18.118 Carica papaya evm.TU.supercontig_18.118 I 0.805
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.805
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.805
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.793
Bra040311 Brassica rapa Bra040311 I 0.793
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.793
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.793
OB03G20590 Oryza brachyantha OB03G20590 I 0.793
OB10G12360 Oryza brachyantha OB10G12360 I 0.793
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I 0.793
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I 0.793
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I 0.793
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I 0.793
BGIOSGA032254 Oryza indica BGIOSGA032254 I 0.782
Bo4g024620 Brassica oleracea Bo4g024620 I 0.782
Bo4g195520 Brassica oleracea Bo4g195520 I 0.782
Bra004910 Brassica rapa Bra004910 I 0.782
GLYMA02G27230 Glycine max GLYMA02G27230 I 0.782
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I 0.782
ONIVA10G03250 Oryza nivara ONIVA10G03250 I 0.782
OPUNC10G02630 Oryza punctata OPUNC10G02630 I 0.782
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I 0.782
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I 0.782
OS10G0162600 Oryza sativa OS10G0162600 I 0.782
TCM_005496 Theobroma cacao TCM_005496 I 0.772
LBD30 Arabidopsis thaliana AT4G00220 D 0.770
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.770
GLYMA01G34540 Glycine max GLYMA01G34540 I 0.770
GLYMA10G11031 Glycine max GLYMA10G11031 I 0.770
OB02G44330 Oryza brachyantha OB02G44330 I 0.770
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.770
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.770
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.770
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.770
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.770
OS02G0820500 Oryza sativa OS02G0820500 I 0.770
Ca_19716 Cicer arietinum Ca_19716 I 0.770
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.770
Bostr.14547s0031 Boechera stricta Bostr.14547s0031 I 0.770
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.770
Lus10000707.g Linum usitatissimum Lus10000707.g I 0.770
Lus10024877.g Linum usitatissimum Lus10024877.g I 0.770
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.770
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.766
LBD30 Arabidopsis lyrata fgenesh2_kg.6__3680__AT4G00220.1 I 0.759
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.759
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.759
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.759
OLONG_028429 Oryza longistaminata OLONG_028429 I 0.759
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.759
Sb01g024400 Sorghum bicolor Sb01g024400 I 0.759
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.759
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.759
Pm020629 Prunus mume Pm020629 I 0.759
29883.m002035 Ricinus communis 29883.m002035 I 0.759
Aquca_009_00958 Aquilegia coerulea Aquca_009_00958 I 0.759
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.759
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I 0.759
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I 0.759
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I 0.759
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I 0.759
Thhalv10028937m.g Eutrema salsugineum Thhalv10028937m.g I 0.759
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I 0.759
Bo1g153580 Brassica oleracea Bo1g153580 I 0.758
Bra036436 Brassica rapa Bra036436 I 0.758
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I 0.758
LBD16 Arabidopsis thaliana AT2G42430 D 0.747
Bo4g016000 Brassica oleracea Bo4g016000 I 0.747
Bo4g191530 Brassica oleracea Bo4g191530 I 0.747
Bra004693 Brassica rapa Bra004693 I 0.747
F775_02052 Aegilops tauschii F775_02052 I 0.747
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I 0.747
GSMUA_Achr5G13230_001 Musa acuminata GSMUA_Achr5G13230_001 I 0.747
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.747
MTR_7g096530 Medicago truncatula MTR_7g096530 I 0.747
MTR_8g036085 Medicago truncatula MTR_8g036085 I 0.747
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.747
Si019578m.g Setaria italica Si019578m.g I 0.747
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I 0.747
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.747
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.747
Cucsa.338130 Cucumis sativus Cucsa.338130 I 0.747
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.747
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.747
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.747
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.747
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.747
chr2.LjT13P17.280.nd Lotus japonicus chr2.LjT13P17.280.nd I 0.747
LjT35F15.70.nd Lotus japonicus LjT35F15.70.nd I 0.747
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.747
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.737
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.737
mgf006429m Mimulus guttatus mgf006429m I 0.737
Bra016877 Brassica rapa Bra016877 I 0.736
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.736
GLYMA03G31830 Glycine max GLYMA03G31830 I 0.736
GLYMA18G45320 Glycine max GLYMA18G45320 I 0.736
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.736
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.736
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.736
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.736
GSMUA_Achr9G10530_001 Musa acuminata GSMUA_Achr9G10530_001 I 0.736
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.736
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.736
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I 0.736
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.736
Cagra.1261s0013 Capsella grandiflora Cagra.1261s0013 I 0.736
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.736
Lus10014757.g Linum usitatissimum Lus10014757.g I 0.736
MDP0000145761 Malus domestica MDP0000145761 I 0.736
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I 0.736
PK25573.1 Cannabis sativa PK25573.1 I 0.736
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.727
Pm017936 Prunus mume Pm017936 I 0.727
cassava15337.m1 Manihot esculenta cassava15337.m1 I 0.727
Bo3g036030 Brassica oleracea Bo3g036030 I 0.724
Bo9g002150 Brassica oleracea Bo9g002150 I 0.724
Bra000257 Brassica rapa Bra000257 I 0.724
Bra037322 Brassica rapa Bra037322 I 0.724
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.724
GLYMA09G40500 Glycine max GLYMA09G40500 I 0.724
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.724
MTR_6g027710 Medicago truncatula MTR_6g027710 I 0.724
MTR_8g036105 Medicago truncatula MTR_8g036105 I 0.724
Sb03g035920 Sorghum bicolor Sb03g035920 N 0.724
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.724
Cucsa.362830 Cucumis sativus Cucsa.362830 I 0.724
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.724
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I 0.724
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.724
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I 0.724
Lus10009298.g Linum usitatissimum Lus10009298.g I 0.724
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.724
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.724
chr3.LjT44N20.90.nd Lotus japonicus chr3.LjT44N20.90.nd I 0.724
chr5.CM0494.160.nd Lotus japonicus chr5.CM0494.160.nd I 0.724
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.717
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.717
MDP0000322059 Malus domestica MDP0000322059 I 0.717
BGIOSGA000736 Oryza indica BGIOSGA000736 N 0.713
BRADI2G51310 Brachypodium distachyon BRADI2G51310 N 0.713
F775_22967 Aegilops tauschii F775_22967 I 0.713
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.713
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.713
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.713
LPERR01G28060 Leersia perrieri LPERR01G28060 N 0.713
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.713
OBART01G32570 Oryza barthii OBART01G32570 N 0.713
OGLUM01G36730 Oryza glumaepatula OGLUM01G36730 N 0.713
OMERI01G29510 Oryza meridionalis OMERI01G29510 N 0.713
ONIVA01G36850 Oryza nivara ONIVA01G36850 N 0.713
OPUNC01G31580 Oryza punctata OPUNC01G31580 N 0.713
ORGLA07G0240800 Oryza glaberrima ORGLA07G0240800 N 0.713
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I 0.713
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.713
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.713
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.713
Traes_6BS_179B5B6E1 Triticum aestivum Traes_6BS_179B5B6E1 I 0.713
Cla021625 Citrullus lanatus Cla021625 I 0.713
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.713
mgf020773m Mimulus guttatus mgf020773m I 0.713
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I 0.713
Lus10033872.g Linum usitatissimum Lus10033872.g I 0.713
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.713
MDP0000429067 Malus domestica MDP0000429067 I 0.713
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.707
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I 0.707
POPTR_0047s00280 Populus trichocarpa POPTR_0047s00280 I 0.705
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I 0.701
GLYMA03G02631 Glycine max GLYMA03G02631 I 0.701
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.701
GLYMA19G34600 Glycine max GLYMA19G34600 I 0.701
GRMZM2G025758 Zea mays GRMZM2G025758 N 0.701
ORUFI01G35770 Oryza rufipogon ORUFI01G35770 N 0.701
OS01G0772100 Oryza sativa OS01G0772100 N 0.701
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.701
Traes_6AS_4EEA3E388 Triticum aestivum Traes_6AS_4EEA3E388 I 0.701
Ca_19598 Cicer arietinum Ca_19598 I 0.701
Ca_20429 Cicer arietinum Ca_20429 I 0.701
Pm017935 Prunus mume Pm017935 I 0.701
Pm020627 Prunus mume Pm020627 I 0.701
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.701
Cucsa.257700 Cucumis sativus Cucsa.257700 I 0.701
Cucsa.388160 Cucumis sativus Cucsa.388160 I 0.701
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.701
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.701
evm.TU.supercontig_18.117 Carica papaya evm.TU.supercontig_18.117 I 0.701
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.701
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.701
PK23185.1 Cannabis sativa PK23185.1 I 0.701