GLYMA10G11031 (Glycine max)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GLYMA10G11031 T245214_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.717 0.717
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G11031.1 LOB 45 144

Links

Other LOB family TFs
Other Glycine max TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA02G27230 Glycine max GLYMA02G27230 I 0.960
cassava15337.m1 Manihot esculenta cassava15337.m1 I 0.889
GLYMA19G30200 Glycine max GLYMA19G30200 I 0.879
30072.m000955 Ricinus communis 30072.m000955 I 0.879
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.879
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.859
TCM_025849 Theobroma cacao TCM_025849 I 0.859
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.859
Pm028642 Prunus mume Pm028642 I 0.859
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I 0.848
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.848
MDP0000322059 Malus domestica MDP0000322059 I 0.848
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.848
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I 0.843
LBD20 Arabidopsis thaliana AT3G03760 I 0.838
Bo1g153580 Brassica oleracea Bo1g153580 I 0.838
Bra036436 Brassica rapa Bra036436 I 0.838
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I 0.838
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I 0.838
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I 0.838
Carubv10015417m.g Capsella rubella Carubv10015417m.g I 0.838
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I 0.838
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I 0.838
Cla002965 Citrullus lanatus Cla002965 I 0.828
mgf006429m Mimulus guttatus mgf006429m I 0.828
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.828
Eucgr.K01522 Eucalyptus grandis Eucgr.K01522 I 0.828
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I 0.828
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I 0.828
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.818
Cucsa.338130 Cucumis sativus Cucsa.338130 I 0.818
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I 0.808
Ca_19716 Cicer arietinum Ca_19716 I 0.808
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.808
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.808
chr2.LjT13P17.280.nd Lotus japonicus chr2.LjT13P17.280.nd I 0.808
MTR_6g027710 Medicago truncatula MTR_6g027710 I 0.798
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.793
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.788
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.788
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.773
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I 0.770
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I 0.770
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.758
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.758
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.747
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.747
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.747
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.747
Cla007068 Citrullus lanatus Cla007068 I 0.747
Pm017936 Prunus mume Pm017936 I 0.747
30174.m008898 Ricinus communis 30174.m008898 I 0.747
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.747
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.747
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.747
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.747
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.747
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.747
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.737
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.737
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.737
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.737
GSMUA_Achr9G10530_001 Musa acuminata GSMUA_Achr9G10530_001 I 0.737
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.737
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.737
OBART03G10450 Oryza barthii OBART03G10450 I 0.737
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.737
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.737
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.737
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.737
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.737
OS03G0246900 Oryza sativa OS03G0246900 I 0.737
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.737
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.737
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.737
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.737
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.737
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.737
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.737
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.737
TCM_005496 Theobroma cacao TCM_005496 I 0.728
GLYMA01G34540 Glycine max GLYMA01G34540 I 0.727
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.727
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.727
OB10G12360 Oryza brachyantha OB10G12360 I 0.727
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I 0.727
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.717
LBD18 Arabidopsis thaliana AT2G45420 D 0.717
BGIOSGA032254 Oryza indica BGIOSGA032254 I 0.717
Bo4g024620 Brassica oleracea Bo4g024620 I 0.717
Bra004910 Brassica rapa Bra004910 I 0.717
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.717
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I 0.717
GLYMA09G40500 Glycine max GLYMA09G40500 I 0.717
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.717
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.717
MTR_8g036085 Medicago truncatula MTR_8g036085 I 0.717
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I 0.717
ONIVA10G03250 Oryza nivara ONIVA10G03250 I 0.717
OPUNC10G02630 Oryza punctata OPUNC10G02630 I 0.717
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I 0.717
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I 0.717
OS10G0162600 Oryza sativa OS10G0162600 I 0.717
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I 0.717
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I 0.717
Carubv10025050m.g Capsella rubella Carubv10025050m.g I 0.717
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.717
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.717
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.717
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I 0.717
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I 0.717
PK21617.1 Cannabis sativa PK21617.1 I 0.717
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I 0.717
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.713
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.707
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.707
Bo4g016000 Brassica oleracea Bo4g016000 I 0.707
Bo4g191530 Brassica oleracea Bo4g191530 I 0.707
Bra004693 Brassica rapa Bra004693 I 0.707
Bra040311 Brassica rapa Bra040311 I 0.707
F775_02052 Aegilops tauschii F775_02052 I 0.707
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.707
GLYMA03G31830 Glycine max GLYMA03G31830 I 0.707
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.707
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.707
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.707
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.707
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.707
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I 0.707
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.707
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.707
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.707
OB02G44330 Oryza brachyantha OB02G44330 I 0.707
OB03G13890 Oryza brachyantha OB03G13890 I 0.707
OBART03G03830 Oryza barthii OBART03G03830 I 0.707
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.707
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.707
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.707
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.707
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.707
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.707
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.707
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.707
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.707
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.707
OS02G0820500 Oryza sativa OS02G0820500 I 0.707
OS03G0149100 Oryza sativa OS03G0149100 I 0.707
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I 0.707
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.707
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.707
Sb03g035920 Sorghum bicolor Sb03g035920 N 0.707
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.707
Si004290m.g Setaria italica Si004290m.g N 0.707
Si040019m.g Setaria italica Si040019m.g I 0.707
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I 0.707
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.707
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.707
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I 0.707
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.707
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.707
28428.m000040 Ricinus communis 28428.m000040 I 0.707
mgf020773m Mimulus guttatus mgf020773m I 0.707
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.707
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.707
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.707
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.707
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I 0.707
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.707
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.707
MDP0000429067 Malus domestica MDP0000429067 I 0.707
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.707
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.707
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.707
Pavir.Ib02517 Panicum virgatum Pavir.Ib02517 I 0.707
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.707
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.707
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.707
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I 0.707
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.707