Traes_4BS_5D9291539 (Triticum aestivum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Traes_4BS_5D9291539 T246191_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.727 0.727
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.727 0.727
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.727 0.727
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.707 0.707
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4BS_5D9291539.1 LOB 29 130

Links

Other LOB family TFs
Other Triticum aestivum TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_22967 Aegilops tauschii F775_22967 I 0.980
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.980
TRIUR3_07751 Triticum urartu TRIUR3_07751 I 0.970
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.949
Traes_4AL_BB3F89030 Triticum aestivum Traes_4AL_BB3F89030 N 0.939
F775_02052 Aegilops tauschii F775_02052 I 0.929
Traes_6BS_179B5B6E1 Triticum aestivum Traes_6BS_179B5B6E1 I 0.929
Traes_6AS_4EEA3E388 Triticum aestivum Traes_6AS_4EEA3E388 I 0.889
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.879
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.869
BGIOSGA026473 Oryza indica BGIOSGA026473 I 0.859
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.859
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.859
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.859
OB08G30680 Oryza brachyantha OB08G30680 I 0.859
OBART08G23860 Oryza barthii OBART08G23860 I 0.859
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I 0.859
OLONG_010223 Oryza longistaminata OLONG_010223 I 0.859
OMERI08G18670 Oryza meridionalis OMERI08G18670 I 0.859
ONIVA09G01330 Oryza nivara ONIVA09G01330 I 0.859
OPUNC08G21770 Oryza punctata OPUNC08G21770 I 0.859
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I 0.859
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I 0.859
OS08G0563400 Oryza sativa OS08G0563400 I 0.859
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.859
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.848
Bra014581 Brassica rapa Bra014581 I 0.848
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.848
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.848
OB03G13890 Oryza brachyantha OB03G13890 I 0.848
OBART03G03830 Oryza barthii OBART03G03830 I 0.848
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.848
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.848
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.848
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.848
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.848
OS03G0149100 Oryza sativa OS03G0149100 I 0.848
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.848
Si015156m.g Setaria italica Si015156m.g I 0.848
Si040019m.g Setaria italica Si040019m.g I 0.848
mgf020773m Mimulus guttatus mgf020773m I 0.848
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.848
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.848
Bo4g108600 Brassica oleracea Bo4g108600 I 0.838
Bo8g092560 Brassica oleracea Bo8g092560 I 0.838
BRADI3G12550 Brachypodium distachyon BRADI3G12550 I 0.838
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I 0.838
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.838
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.838
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.838
Sb07g023810 Sorghum bicolor Sb07g023810 I 0.838
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.838
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.838
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.838
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.838
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.838
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.838
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.838
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.838
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.838
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I 0.838
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.838
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.838
LBD29 Arabidopsis thaliana AT3G58190 I 0.828
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.828
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.828
28428.m000040 Ricinus communis 28428.m000040 I 0.828
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.828
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I 0.828
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.828
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.828
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.828
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I 0.828
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.828
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.828
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I 0.828
AC149818.2_FG009 Zea mays AC149818.2_FG009 I 0.818
LBD17 Arabidopsis thaliana AT2G42440 N 0.818
Bra007385 Brassica rapa Bra007385 N 0.818
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.818
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.818
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.818
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.818
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I 0.818
PRUPE_ppa025889mg Prunus persica PRUPE_ppa025889mg I 0.818
Ca_07763 Cicer arietinum Ca_07763 I 0.818
Cla006087 Citrullus lanatus Cla006087 I 0.818
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.818
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.818
Bo4g191540 Brassica oleracea Bo4g191540 N 0.808
Bra016876 Brassica rapa Bra016876 N 0.808
fgenesh1_pg.C_scaffold_4002383 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4002383 N 0.808
Ca_12214 Cicer arietinum Ca_12214 I 0.808
Pm020628 Prunus mume Pm020628 I 0.808
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.808
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.808
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.808
GLYMA03G31860 Glycine max GLYMA03G31860 I 0.798
GLYMA19G34600 Glycine max GLYMA19G34600 I 0.798
Si019578m.g Setaria italica Si019578m.g I 0.798
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I 0.798
Thhalv10017903m.g Eutrema salsugineum Thhalv10017903m.g N 0.798
LjT35F15.90.nd Lotus japonicus LjT35F15.90.nd I 0.798
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.788
OB02G44330 Oryza brachyantha OB02G44330 I 0.788
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I 0.788
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.788
gene08254-v1.0-hybrid Fragaria vesca gene08254-v1.0-hybrid I 0.788
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.788
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.788
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.778
MTR_1g070205 Medicago truncatula MTR_1g070205 I 0.778
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.778
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.778
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.778
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.778
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.778
OS02G0820500 Oryza sativa OS02G0820500 I 0.778
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I 0.778
Bostr.25993s0537 Boechera stricta Bostr.25993s0537 I 0.778
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.768
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.768
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.768
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.768
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.768
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.768
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.768
OBART03G10450 Oryza barthii OBART03G10450 I 0.768
OGLUM03G03710 Oryza glumaepatula OGLUM03G03710 I 0.768
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.768
OLONG_020841 Oryza longistaminata OLONG_020841 I 0.768
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.768
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.768
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.768
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.768
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.768
OS03G0246900 Oryza sativa OS03G0246900 I 0.768
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.768
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.768
TCM_004103 Theobroma cacao TCM_004103 I 0.768
Pm020627 Prunus mume Pm020627 I 0.768
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.768
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.758
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.758
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.758
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.758
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.758
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.758
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.758
30174.m008898 Ricinus communis 30174.m008898 I 0.758
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.758
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.758
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.758
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.758
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.758
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.747
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.747
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.747
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.747
Sb01g047000 Sorghum bicolor Sb01g047000 I 0.747
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.747
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.747
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.747
Cla006088 Citrullus lanatus Cla006088 I 0.747
Cla007068 Citrullus lanatus Cla007068 I 0.747
Cla015094 Citrullus lanatus Cla015094 I 0.747
Pm017936 Prunus mume Pm017936 I 0.747
Cucsa.053440 Cucumis sativus Cucsa.053440 I 0.747
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.747
Cucsa.388160 Cucumis sativus Cucsa.388160 I 0.747
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.747
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.747
Bo4g016000 Brassica oleracea Bo4g016000 I 0.737
Bo4g191530 Brassica oleracea Bo4g191530 I 0.737
Bra004693 Brassica rapa Bra004693 I 0.737
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I 0.737
GLYMA03G31830 Glycine max GLYMA03G31830 I 0.737
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.737
GRMZM2G092483 Zea mays GRMZM2G092483 I 0.737
Si037727m.g Setaria italica Si037727m.g I 0.737
TCM_004106 Theobroma cacao TCM_004106 I 0.737
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I 0.737
Traes_4DL_05F87867C Triticum aestivum Traes_4DL_05F87867C N 0.737
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.737
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.737
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.737
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.737
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I 0.737
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I 0.737
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.737
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.737
Pavir.Ib00282 Panicum virgatum Pavir.Ib00282 I 0.737
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.737
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.737
LBD16 Arabidopsis thaliana AT2G42430 D 0.727
Bra016877 Brassica rapa Bra016877 I 0.727
GLYMA02G27230 Glycine max GLYMA02G27230 I 0.727
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.727
GLYMA19G30200 Glycine max GLYMA19G30200 I 0.727
GLYMA19G34590 Glycine max GLYMA19G34590 I 0.727
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.727
MLOC_10783 Hordeum vulgare MLOC_10783 N 0.727
PGSC0003DMG400009713 Solanum tuberosum PGSC0003DMG400009713 I 0.727
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.727
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.727
Traes_4AL_3BA1D51E2 Triticum aestivum Traes_4AL_3BA1D51E2 N 0.727
Traes_4BL_F71DE14F7 Triticum aestivum Traes_4BL_F71DE14F7 N 0.727
Traes_4BS_B43A99154 Triticum aestivum Traes_4BS_B43A99154 N 0.727
LBD33 Vitis vinifera VIT_13s0019g02060 N 0.727
Pm020629 Prunus mume Pm020629 I 0.727
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.727
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.727
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.727
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.727
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I 0.727
Lus10000707.g Linum usitatissimum Lus10000707.g I 0.727
Lus10024877.g Linum usitatissimum Lus10024877.g I 0.727
MDP0000145761 Malus domestica MDP0000145761 I 0.727
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.727
Pavir.J24246 Panicum virgatum Pavir.J24246 I 0.727
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.727
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.727
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I 0.727
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.727
Bo3g036030 Brassica oleracea Bo3g036030 I 0.717
Bra000257 Brassica rapa Bra000257 I 0.717
OB10G12360 Oryza brachyantha OB10G12360 I 0.717
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.717
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I 0.717
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I 0.717
VIT_15s0048g00840 Vitis vinifera VIT_15s0048g00840 I 0.717
29883.m002035 Ricinus communis 29883.m002035 I 0.717
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.717
Eucgr.E01415 Eucalyptus grandis Eucgr.E01415 I 0.717
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I 0.717
Bo3g036000 Brassica oleracea Bo3g036000 I 0.710
LBD18 Arabidopsis thaliana AT2G45420 D 0.707
BGIOSGA011866 Oryza indica BGIOSGA011866 I 0.707
Bo4g024620 Brassica oleracea Bo4g024620 I 0.707
Bo4g052270 Brassica oleracea Bo4g052270 N 0.707
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.707
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I 0.707
GLYMA01G34523 Glycine max GLYMA01G34523 I 0.707
GLYMA10G11031 Glycine max GLYMA10G11031 I 0.707
GRMZM2G076327 Zea mays GRMZM2G076327 I 0.707
LPERR03G03460 Leersia perrieri LPERR03G03460 I 0.707
MTR_7g096530 Medicago truncatula MTR_7g096530 I 0.707
MTR_8g036105 Medicago truncatula MTR_8g036105 I 0.707
OB03G13880 Oryza brachyantha OB03G13880 I 0.707
OPUNC03G03510 Oryza punctata OPUNC03G03510 I 0.707
ORGLA03G0035800 Oryza glaberrima ORGLA03G0035800 I 0.707
OS03G0149000 Oryza sativa OS03G0149000 I 0.707
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.707
Ca_12213 Cicer arietinum Ca_12213 I 0.707
Cla007069 Citrullus lanatus Cla007069 I 0.707
30072.m000955 Ricinus communis 30072.m000955 I 0.707
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.707
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.707
mgf006429m Mimulus guttatus mgf006429m I 0.707
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I 0.707
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I 0.707
Carubv10025050m.g Capsella rubella Carubv10025050m.g I 0.707
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.707
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I 0.707
evm.TU.supercontig_18.117 Carica papaya evm.TU.supercontig_18.117 I 0.707
gene19356-v1.0-hybrid Fragaria vesca gene19356-v1.0-hybrid I 0.707
MDP0000131964 Malus domestica MDP0000131964 I 0.707
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I 0.707
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I 0.707