GLYMA19G30200 (Glycine max)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GLYMA19G30200 T245255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD30
M01066_2.00 		Arabidopsis thaliana
BVWWWHVNGG
CCNBDWWWBV		 PBM
Sullivan et al.(2014)
pTH7467 		0.737 0.737
LBD30
M01067_2.00 		Arabidopsis thaliana
VWWWNVNGGD
HCCNBNWWWB		 PBM
Sullivan et al.(2014)
pTH7616 		0.737 0.737
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.727 0.727
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA19G30200.2 LOB 45 144

Links

Other LOB family TFs
Other Glycine max TFs

245 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA02G27230 Glycine max GLYMA02G27230 I 0.879
GLYMA10G11031 Glycine max GLYMA10G11031 I 0.879
cassava15337.m1 Manihot esculenta cassava15337.m1 I 0.869
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.869
30072.m000955 Ricinus communis 30072.m000955 I 0.859
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I 0.848
MDP0000322059 Malus domestica MDP0000322059 I 0.838
Ca_19716 Cicer arietinum Ca_19716 I 0.838
Pm028642 Prunus mume Pm028642 I 0.838
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.838
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.838
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.838
TCM_025849 Theobroma cacao TCM_025849 I 0.838
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I 0.828
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.828
MTR_6g027710 Medicago truncatula MTR_6g027710 I 0.828
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I 0.828
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.828
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I 0.818
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.818
LBD20 Arabidopsis thaliana AT3G03760 I 0.818
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I 0.818
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I 0.818
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I 0.818
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I 0.818
Carubv10015417m.g Capsella rubella Carubv10015417m.g I 0.818
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.818
mgf006429m Mimulus guttatus mgf006429m I 0.818
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.818
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I 0.818
Bo1g153580 Brassica oleracea Bo1g153580 I 0.818
Bra036436 Brassica rapa Bra036436 I 0.818
Cla002965 Citrullus lanatus Cla002965 I 0.798
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.798
Eucgr.K01522 Eucalyptus grandis Eucgr.K01522 I 0.798
chr2.LjT13P17.280.nd Lotus japonicus chr2.LjT13P17.280.nd I 0.788
Cucsa.338130 Cucumis sativus Cucsa.338130 I 0.788
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.788
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.778
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.778
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.778
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.768
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.768
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.768
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.768
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.768
OBART03G10450 Oryza barthii OBART03G10450 I 0.768
Cla007068 Citrullus lanatus Cla007068 I 0.768
OS03G0246900 Oryza sativa OS03G0246900 I 0.768
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.768
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.768
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.768
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.768
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.768
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.768
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.768
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.768
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.768
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.768
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.768
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.768
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.768
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.768
Pm017936 Prunus mume Pm017936 I 0.768
30174.m008898 Ricinus communis 30174.m008898 I 0.758
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I 0.758
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.758
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.758
Cla006087 Citrullus lanatus Cla006087 I 0.758
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.758
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.758
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.758
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.758
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.758
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I 0.758
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.758
LBD29 Arabidopsis thaliana AT3G58190 I 0.747
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.747
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.747
Ca_07763 Cicer arietinum Ca_07763 I 0.747
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.747
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.747
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.747
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.747
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.747
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.747
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I 0.747
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.747
PRUPE_ppa025889mg Prunus persica PRUPE_ppa025889mg I 0.747
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.747
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.747
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.747
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.747
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.747
mgf020773m Mimulus guttatus mgf020773m I 0.747
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.747
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.747
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.747
Bostr.14547s0031 Boechera stricta Bostr.14547s0031 I 0.737
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I 0.737
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.737
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.737
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.737
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.737
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.737
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I 0.737
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I 0.737
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.737
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I 0.737
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.737
Pm020628 Prunus mume Pm020628 I 0.737
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.737
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I 0.737
28428.m000040 Ricinus communis 28428.m000040 I 0.737
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.737
Pm020627 Prunus mume Pm020627 I 0.737
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I 0.737
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.737
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.737
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.737
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.737
Si040019m.g Setaria italica Si040019m.g I 0.737
GSMUA_Achr9G10530_001 Musa acuminata GSMUA_Achr9G10530_001 I 0.737
Bo4g108600 Brassica oleracea Bo4g108600 I 0.737
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.737
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.737
OB03G13890 Oryza brachyantha OB03G13890 I 0.737
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.737
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.737
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.737
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.737
OBART03G03830 Oryza barthii OBART03G03830 I 0.737
OB10G12360 Oryza brachyantha OB10G12360 I 0.737
F775_02052 Aegilops tauschii F775_02052 I 0.737
GLYMA01G34540 Glycine max GLYMA01G34540 I 0.737
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.737
MTR_1g070205 Medicago truncatula MTR_1g070205 I 0.737
Bra014581 Brassica rapa Bra014581 I 0.737
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.737
Bo8g092560 Brassica oleracea Bo8g092560 I 0.737
LBD30 Arabidopsis thaliana AT4G00220 D 0.737
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.737
LBD30 Arabidopsis lyrata fgenesh2_kg.6__3680__AT4G00220.1 I 0.737
GLYMA09G40500 Glycine max GLYMA09G40500 I 0.737
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.737
OS03G0149100 Oryza sativa OS03G0149100 I 0.737
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.737
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.737
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.727
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.727
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I 0.727
Pavir.Ib02517 Panicum virgatum Pavir.Ib02517 I 0.727
MTR_8g036085 Medicago truncatula MTR_8g036085 I 0.727
Bo4g024620 Brassica oleracea Bo4g024620 I 0.727
Bo9g002150 Brassica oleracea Bo9g002150 I 0.727
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.727
Carubv10025050m.g Capsella rubella Carubv10025050m.g I 0.727
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.727
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I 0.727
Carubv10001875m.g Capsella rubella Carubv10001875m.g I 0.727
Cagra.1261s0014 Capsella grandiflora Cagra.1261s0014 I 0.727
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.727
gene08254-v1.0-hybrid Fragaria vesca gene08254-v1.0-hybrid I 0.727
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I 0.727
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I 0.727
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.727
Bra008514 Brassica rapa Bra008514 I 0.727
Bo9g002160 Brassica oleracea Bo9g002160 I 0.727
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I 0.727
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I 0.727
Ca_12214 Cicer arietinum Ca_12214 I 0.727
Bra037322 Brassica rapa Bra037322 I 0.727
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I 0.727
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I 0.727
LjT35F15.90.nd Lotus japonicus LjT35F15.90.nd I 0.727
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.727
LBD18 Arabidopsis thaliana AT2G45420 D 0.727
Bra004910 Brassica rapa Bra004910 I 0.727
OS10G0162600 Oryza sativa OS10G0162600 I 0.727
MDP0000429067 Malus domestica MDP0000429067 I 0.727
OPUNC10G02630 Oryza punctata OPUNC10G02630 I 0.727
Bra037323 Brassica rapa Bra037323 I 0.727
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I 0.727
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I 0.727
Bo2g097560 Brassica oleracea Bo2g097560 I 0.727
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.727
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.727
OB08G30680 Oryza brachyantha OB08G30680 I 0.727
BGIOSGA032254 Oryza indica BGIOSGA032254 I 0.727
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.727
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.727
ONIVA10G03250 Oryza nivara ONIVA10G03250 I 0.727
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I 0.727
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.727
Bra040311 Brassica rapa Bra040311 I 0.717
F775_22967 Aegilops tauschii F775_22967 I 0.717
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I 0.717
MTR_7g074990 Medicago truncatula MTR_7g074990 I 0.717
Traes_6BS_179B5B6E1 Triticum aestivum Traes_6BS_179B5B6E1 I 0.717
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.717
TRIUR3_07751 Triticum urartu TRIUR3_07751 I 0.717
PK25573.1 Cannabis sativa PK25573.1 I 0.717
Thhalv10028937m.g Eutrema salsugineum Thhalv10028937m.g I 0.717
PRUPE_ppa017589mg Prunus persica PRUPE_ppa017589mg I 0.717
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.717
TCM_005497 Theobroma cacao TCM_005497 I 0.717
GLYMA19G34600 Glycine max GLYMA19G34600 I 0.717
Si015156m.g Setaria italica Si015156m.g I 0.717
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.717
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I 0.717
Ca_20428 Cicer arietinum Ca_20428 I 0.717
Bo4g016000 Brassica oleracea Bo4g016000 I 0.707
Bo4g191530 Brassica oleracea Bo4g191530 I 0.707
Bo4g195520 Brassica oleracea Bo4g195520 I 0.707
Bra004693 Brassica rapa Bra004693 I 0.707
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I 0.707
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.707
BGIOSGA026473 Oryza indica BGIOSGA026473 I 0.707
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.707
Pm017935 Prunus mume Pm017935 I 0.707
Cla007069 Citrullus lanatus Cla007069 I 0.707
ONIVA09G01330 Oryza nivara ONIVA09G01330 I 0.707
OMERI08G18670 Oryza meridionalis OMERI08G18670 I 0.707
OLONG_010223 Oryza longistaminata OLONG_010223 I 0.707
OPUNC08G21770 Oryza punctata OPUNC08G21770 I 0.707
Ca_12213 Cicer arietinum Ca_12213 I 0.707
Sb07g023810 Sorghum bicolor Sb07g023810 I 0.707
OS08G0563400 Oryza sativa OS08G0563400 I 0.707
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I 0.707
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I 0.707
30174.m008897 Ricinus communis 30174.m008897 I 0.707
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I 0.707
GLYMA19G34590 Glycine max GLYMA19G34590 I 0.707
GRMZM2G076327 Zea mays GRMZM2G076327 I 0.707
GLYMA18G45320 Glycine max GLYMA18G45320 I 0.707
GLYMA03G31860 Glycine max GLYMA03G31860 I 0.707
gene19356-v1.0-hybrid Fragaria vesca gene19356-v1.0-hybrid I 0.707
Bra007385 Brassica rapa Bra007385 N 0.707
Cagra.1261s0013 Capsella grandiflora Cagra.1261s0013 I 0.707
OBART08G23860 Oryza barthii OBART08G23860 I 0.707
MTR_7g096530 Medicago truncatula MTR_7g096530 I 0.707
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.707
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.707
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.707
TCM_004103 Theobroma cacao TCM_004103 I 0.705