chr5.CM0048.50.nd (Lotus japonicus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 chr5.CM0048.50.nd T247429_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.CM0048.50.nd LOB 13 50

Links

Other LOB family TFs
Other Lotus japonicus TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA12G34300 Glycine max GLYMA12G34300 I 0.000
GLYMA13G36260 Glycine max GLYMA13G36260 I 0.000
GLYMA15G06803 Glycine max GLYMA15G06803 I 0.000
GLYMA15G06860 Glycine max GLYMA15G06860 I 0.000
GSMUA_Achr8G33180_001 Musa acuminata GSMUA_Achr8G33180_001 I 0.000
OMERI02G00630 Oryza meridionalis OMERI02G00630 N 0.000
PDK_20s1322801g004 Phoenix dactylifera PDK_20s1322801g004 N 0.000
Pavir.Ab02693 Panicum virgatum Pavir.Ab02693 N 0.000
Pavir.Ab00172 Panicum virgatum Pavir.Ab00172 N 0.000
Pavir.Aa03509 Panicum virgatum Pavir.Aa03509 N 0.000
Si018232m.g Setaria italica Si018232m.g N 0.000
Sb04g001200 Sorghum bicolor Sb04g001200 N 0.000
OS02G0116600 Oryza sativa OS02G0116600 N 0.000
ORUFI02G01220 Oryza rufipogon ORUFI02G01220 N 0.000
ORGLA02G0011200 Oryza glaberrima ORGLA02G0011200 N 0.000
OPUNC02G00650 Oryza punctata OPUNC02G00650 N 0.000
ONIVA02G01100 Oryza nivara ONIVA02G01100 N 0.000
AMTR_s00029p00112130 Amborella trichopoda AMTR_s00029p00112130 N 0.000
OLONG_000275 Oryza longistaminata OLONG_000275 N 0.000
OGLUM02G01100 Oryza glumaepatula OGLUM02G01100 N 0.000
LPERR02G01020 Leersia perrieri LPERR02G01020 N 0.000
GRMZM5G856837 Zea mays GRMZM5G856837 N 0.000
GRMZM2G314882 Zea mays GRMZM2G314882 N 0.000
BGIOSGA007247 Oryza indica BGIOSGA007247 N 0.000