naif1 (Gasterosteus aculeatus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 ENSGACG00000018458 T248300_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
naif1.S
M02282_2.00 		Xenopus laevis
NNDRCGTAN
NTACGYHNN		 PBM
Weirauch et al.(2014)
pTH9299 		0.913 0.544
naif1
M02281_2.00 		Xenopus tropicalis
NNNCGYANN
NNTRCGNNN		 PBM
Weirauch et al.(2014)
pTH8560 		0.911 0.506
NAIF1_CHICK
M01260_2.00 		Gallus gallus
NNNDRCGTAN
NTACGYHNNN		 PBM
Lambert et al.(2019)
pTH9808 		0.877 0.418
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000024401 MADF 21 105
ENSGACP00000024403 MADF 24 109

Links

Other MADF family TFs
Other Gasterosteus aculeatus TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK27149.1 Cannabis sativa PK27149.1 D
POPTR_0002s11660 Populus trichocarpa POPTR_0002s11660 I
POPTR_0014s01390 Populus trichocarpa POPTR_0014s01390 I
30170.m013679 Ricinus communis 30170.m013679 I
cassava22418.valid.m1 Manihot esculenta cassava22418.valid.m1 I
cassava8864.m1 Manihot esculenta cassava8864.m1 I
gene02614-v1.0-hybrid Fragaria vesca gene02614-v1.0-hybrid I
MDP0000140166 Malus domestica MDP0000140166 I
MDP0000200822 Malus domestica MDP0000200822 I
SapurV1A.3851s0010 Salix purpurea SapurV1A.3851s0010 I