GLYMA20G33031 (Glycine max)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GLYMA20G33031 T249135_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.839 0.615
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.839 0.615
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.839 0.615
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G33031.1 MADF 70 161

Links

Other MADF family TFs
Other Glycine max TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT3G10030 Arabidopsis thaliana AT3G10030 D 0.839
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I 0.820
28077.m000081 Ricinus communis 28077.m000081 I 0.914
29815.m000504 Ricinus communis 29815.m000504 I 0.820
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I 0.820
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I 0.828
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I 0.867
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I 0.839
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I 0.839
Carubv10015256m.g Capsella rubella Carubv10015256m.g I 0.839
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I 0.901
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I 0.846
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I 0.837
MDP0000201016 Malus domestica MDP0000201016 I 0.914
MDP0000399495 Malus domestica MDP0000399495 I 0.914
MDP0000415733 Malus domestica MDP0000415733 I 0.914
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I 0.890
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I 0.890
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I 0.839
MLOC_28975 Hordeum vulgare MLOC_28975 I 0.836
Bo5g137800 Brassica oleracea Bo5g137800 I 0.813
Bra029812 Brassica rapa Bra029812 I 0.813
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I 0.839
GLYMA10G07490 Glycine max GLYMA10G07490 I 0.834
GLYMA10G34520 Glycine max GLYMA10G34520 I 0.924
GLYMA13G21371 Glycine max GLYMA13G21371 I 0.834
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I 0.840
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I 0.824
Ca_20148 Cicer arietinum Ca_20148 I 0.834
MTR_1g061600 Medicago truncatula MTR_1g061600 I 0.834
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I 0.834
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I 0.889
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I 0.889
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I 0.920
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I 0.834
TCM_043551 Theobroma cacao TCM_043551 I 0.882
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I 0.846