MLOC_70549 (Hordeum vulgare)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 MLOC_70549 T249449_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.871 0.698
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.933 0.714
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.871 0.698
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.835 0.600
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.835 0.600
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_70549.1 MADF 301 372
MLOC_70549.1 MADF 676 748
MLOC_70549.2 MADF 301 374
MLOC_70549.2 MADF 579 651
MLOC_70549.3 MADF 72 145

Links

Other MADF family TFs
Other Hordeum vulgare TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV06_06886 Exophiala oligosperma PV06_06886 N 0.000
HCBG_07066 Histoplasma capsulatum HCBG_07066 N 0.000
HMPREF1120_09077 Exophiala dermatitidis HMPREF1120_09077 N 0.000
HMPREF1541_02517 Cyphellophora europaea HMPREF1541_02517 N 0.000
LEMA_P074270.1 Leptosphaeria maculans LEMA_P074270.1 N 0.000
MCYG_04601 Arthroderma otae MCYG_04601 N 0.000
MYCFIDRAFT_217053 Pseudocercospora fijiensis MYCFIDRAFT_217053 N 0.000
PABG_02006 Paracoccidioides brasiliensis PABG_02006 N 0.000
PDE_00973 Penicillium oxalicum PDE_00973 N 0.000
PEX1_097650 Penicillium expansum PEX1_097650 N 0.000
PITC_007200 Penicillium italicum PITC_007200 N 0.000
PV04_10035 Capronia semiimmersa PV04_10035 N 0.000
PV05_03864 Exophiala xenobiotica PV05_03864 N 0.000
G647_09336 Cladophialophora carrionii G647_09336 N 0.000
PV08_07435 Exophiala spinifera PV08_07435 N 0.000
PV10_01710 Exophiala mesophila PV10_01710 N 0.000
PV11_05777 Exophiala sideris PV11_05777 N 0.000
PVAR5_2342 Byssochlamys spectabilis PVAR5_2342 N 0.000
SETTUDRAFT_34428 Setosphaeria turcica SETTUDRAFT_34428 N 0.000
SNOG_02548 Phaeosphaeria nodorum SNOG_02548 N 0.000
Z517_09513 Fonsecaea pedrosoi Z517_09513 N 0.000
Z518_07681 Rhinocladiella mackenziei Z518_07681 N 0.000
Z519_12336 Cladophialophora bantiana Z519_12336 N 0.000
estExt_fgenesh1_pg.C_180114 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_180114 N 0.000
estExt_Genewise1.C_50962 Cochliobolus heterostrophus C5 estExt_Genewise1.C_50962 N 0.000
CADANGAG00013376 Aspergillus niger CADANGAG00013376 N 0.000
MCYG_04601 Microsporum canis MCYG_04601 N 0.000
SNOG_02548 Stagonospora nodorum SNOG_02548 N 0.000
A1O1_08815 Capronia coronata A1O1_08815 N 0.000
A1O3_06358 Capronia epimyces A1O3_06358 N 0.000
A1O5_12074 Cladophialophora psammophila A1O5_12074 N 0.000
A1O7_09385 Cladophialophora yegresii A1O7_09385 N 0.000
A1O9_05599 Exophiala aquamarina A1O9_05599 N 0.000
BDDG_01560 Blastomyces dermatitidis BDDG_01560 N 0.000
ACLA_057380 Aspergillus clavatus CADACLAG00005479 N 0.000
CADAFLAG00013320 Aspergillus flavus CADAFLAG00013320 N 0.000
AFUA_8G04050 Aspergillus fumigatus CADAFUAG00003174 N 0.000
CIMG_04403 Coccidioides immitis CIMG_04403 N 0.000
ANIA_01414 Aspergillus nidulans CADANIAG00008025 N 0.000
CADAORAG00009949 Aspergillus oryzae CADAORAG00009949 N 0.000
ATEG_00017 Aspergillus terreus CADATEAG00006845 N 0.000
NFIA_096760 Neosartorya fischeri CADNFIAG00008980 N 0.000
COCC4DRAFT_196527 Bipolaris maydis COCC4DRAFT_196527 N 0.000
COCCADRAFT_86582 Bipolaris zeicola COCCADRAFT_86582 N 0.000
COCMIDRAFT_1020 Bipolaris oryzae COCMIDRAFT_1020 N 0.000
COCSADRAFT_236058 Bipolaris sorokiniana COCSADRAFT_236058 N 0.000
COCVIDRAFT_89258 Bipolaris victoriae COCVIDRAFT_89258 N 0.000
CPC735_073390 Coccidioides posadasii CPC735_073390 N 0.000
DOTSEDRAFT_73764 Dothistroma septosporum DOTSEDRAFT_73764 N 0.000