OPUNC04G09570 (Oryza punctata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OPUNC04G09570 T249582_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.872 0.686
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.872 0.686
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.872 0.686
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.825 0.614
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC04G09570.1 MADF 143 222

Links

Other MADF family TFs
Other Oryza punctata TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP60 Arabidopsis thaliana AT1G42990 D
ATBZIP60 Arabidopsis lyrata fgenesh2_kg.1__3703__AT1G42990.1 I
Bostr.12302s0013 Boechera stricta Bostr.12302s0013 I
Cagra.2795s0001 Capsella grandiflora Cagra.2795s0001 I
Carubv10009864m.g Capsella rubella Carubv10009864m.g I
Thhalv10004635m.g Eutrema salsugineum Thhalv10004635m.g I
Ca_20172 Cicer arietinum Ca_20172 N