PK26075.1 (Cannabis sativa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 PK26075.1 T251178_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK26075.1
M01265_2.00		 Cannabis sativa
NNRGTDANWN
NWNTHACYNN		 PBM
Lambert et al.(2019)
pTH11260		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01265_2.00 MADF 51 121

DNA Binding Domains

Protein ID Domain From To Sequence
PK26075.1 MADF 86 156

Links

Other MADF family TFs
Other Cannabis sativa TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART10G15720 Oryza barthii OBART10G15720 I 0.916
OLONG_007248 Oryza longistaminata OLONG_007248 I 0.886
Traes_1DL_9EFDBD741 Triticum aestivum Traes_1DL_9EFDBD741 I 0.920
Traes_4DL_64E445D4A Triticum aestivum Traes_4DL_64E445D4A I 0.914
Traes_6DL_09329CC5D Triticum aestivum Traes_6DL_09329CC5D I 0.885
Lus10014375.g Linum usitatissimum Lus10014375.g I 0.850
Lus10023872.g Linum usitatissimum Lus10023872.g I 0.835
Pavir.Aa01102 Panicum virgatum Pavir.Aa01102 I 0.878
PK27404.1 Cannabis sativa PK27404.1 I 0.829