CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_6DL_09329CC5D
(
Triticum aestivum
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
Traes_6DL_09329CC5D
T249970_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK26075.1
M01265_2.00
Cannabis sativa
NNRGTDANWN
NWNTHACYNN
PBM
Lambert et al.(2019)
pTH11260
0.885
0.769
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_6DL_09329CC5D.1
MADF
20
74
SEMDGAFRNAALKAPVWEEVSRKLAELGYRRSAKKCKEKFENVDKYYRRTKEGRA
Links
Other
MADF
family TFs
Other
Triticum aestivum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_007248
Oryza longistaminata
OLONG_007248
I
0.937
Pavir.Aa01102
Panicum virgatum
Pavir.Aa01102
I
0.922
OBART10G15720
Oryza barthii
OBART10G15720
I
0.906
Traes_4DL_64E445D4A
Triticum aestivum
Traes_4DL_64E445D4A
I
0.894
PK26075.1
Cannabis sativa
PK26075.1
D
0.885
Traes_1DL_9EFDBD741
Triticum aestivum
Traes_1DL_9EFDBD741
I
0.876