LjSGA_010102.1 (Lotus japonicus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 LjSGA_010102.1 T251212_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27404.1_CONSTRUCT
M01261_2.00 		PBM CONSTRUCTS
NNGGTAAAWN
NWTTTACCNN		 PBM
Lambert et al.(2019)
pTH11345 		0.925 0.797
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_010102.1 MADF 76 147

Links

Other MADF family TFs
Other Lotus japonicus TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.22157s0123 Boechera stricta Bostr.22157s0123 I
AT1G62085 Arabidopsis thaliana AT1G62085 N
scaffold_200363.1 Arabidopsis lyrata scaffold_200363.1 N
Bostr.22157s0091 Boechera stricta Bostr.22157s0091 N
Bostr.22157s0134 Boechera stricta Bostr.22157s0134 N
Bostr.22157s0159 Boechera stricta Bostr.22157s0159 N
Cagra.6049s0005 Capsella grandiflora Cagra.6049s0005 N
Carubv10020262m.g Capsella rubella Carubv10020262m.g N
Carubv10021881m.g Capsella rubella Carubv10021881m.g N