CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_200363.1
(
Arabidopsis lyrata
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
scaffold_200363.1
T263552_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_200363.1
mTERF
1
333
MSNIIKMYPLLLIADADKSLGPKLQFLQSRGASSSELTQVVSKVPKILGKREGKSLSRYYDFIKVIIEADKSSSKYEKLCHALPEGSRQDNKIRNVLVLRELGVPQRLLFSLLISDSGPVCGKEKFEESLKKVVEMGFDPTTSKFVKALHGFYQMSDKTIEEKLDVYKRLGFSVEDVWVIFKKWPCSLKFSEEKITQTIETLKMCGLDENEVLQVLKKYPQFIRISEQKILSLIETFLGVGFSRDECVMIIKGFPMCFGLSAETVKKKTEFLVKKMNWPLKSVVSNPAGLGYSLQKRIVPRCNVIKALMSKGSLGSELPSVASVLACTDQAFL
Links
Other
mTERF
family TFs
Other
Arabidopsis lyrata
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_200368.1
Arabidopsis lyrata
scaffold_200368.1
N
0.750
Bostr.22157s0091
Boechera stricta
Bostr.22157s0091
N
0.727
Bo9g040760
Brassica oleracea
Bo9g040760
N
0.719
Carubv10020262m.g
Capsella rubella
Carubv10020262m.g
N
0.716
Cagra.6049s0005
Capsella grandiflora
Cagra.6049s0005
N
0.709
scaffold_200307.1
Arabidopsis lyrata
scaffold_200307.1
N
0.706
Carubv10021881m.g
Capsella rubella
Carubv10021881m.g
N
0.706