CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MCYG_04979
(
Microsporum canis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
MCYG_04979
T252707_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA
TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.729
0.729
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.729
0.729
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
0.729
0.729
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
0.729
0.729
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_04979T0
MADS box
10
57
AIKDDRNRSVTFLKRKGGLFKKAHELSVLCSVDVTVIIFGHNKKLYEF
Links
Other
MADS box
family TFs
Other
Microsporum canis
TFs
229 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RO3G_01826
Rhizopus oryzae
RO3G_01826
I
GLOINDRAFT_221110
Rhizophagus irregularis
GLOINDRAFT_221110
I
GLOINDRAFT_24118
Rhizophagus irregularis
GLOINDRAFT_24118
I
GLOINDRAFT_58638
Rhizophagus irregularis
GLOINDRAFT_58638
I
estExt_fgeneshMC_pg.C_10568
Mucor circinelloides
estExt_fgeneshMC_pg.C_10568
I
gw1.1.1257.1
Mucor circinelloides
gw1.1.1257.1
I
gw1.25.121.1
Phycomyces blakesleeanus
gw1.25.121.1
I
gw1.73.24.1
Phycomyces blakesleeanus
gw1.73.24.1
I
PHACADRAFT_73403
Phanerochaete carnosa
PHACADRAFT_73403
N