AAEL008720 (Aedes aegypti)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AAEL008720 T252749_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		1.000 1.000
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		1.000 1.000
srfA
M02283_2.00 		Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK		 PBM
Weirauch et al.(2014)
pTH5539 		0.962 0.962
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.962 0.962
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.962 0.962
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.962 0.962
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.962 0.962
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.962 0.962
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.962 0.962
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.962 0.962
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.962 0.962
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.962 0.962
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.962 0.962
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.962 0.962
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.962 0.962
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.962 0.962
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.962 0.962
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.962 0.962
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.962 0.962
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.962 0.962
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.962 0.962
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.962 0.962
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.962 0.962
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.962 0.962
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.962 0.962
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.923 0.923
MCM1
M01558_2.00 		Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR		 PBM
Zhu et al.(2009)
Mcm1 		0.808 0.808
MCM1
M08589_2.00 		Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND		 Misc
DeBoer et al.(2011)
YMR043W_831 		0.808 0.808
MCM1
M10990_2.00 		Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW		 Transfac
Matys et al.(2006)
F$MCM1_01 		0.808 0.808
MCM1
M10991_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_02 		0.808 0.808
MCM1
M10992_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_Q6 		0.808 0.808
MCM1
M08458_2.00 		Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA		 COMPILED
Mathelier et al.(2014)
MA0331.1 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAEL008720-PA MADS box 1 26

Links

Other MADS box family TFs
Other Aedes aegypti TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA07G0073600 Oryza glaberrima ORGLA07G0073600 N 0.000
ONIVA01G42540 Oryza nivara ONIVA01G42540 N 0.000
ONIVA07G05980 Oryza nivara ONIVA07G05980 N 0.000
ONIVA07G05990 Oryza nivara ONIVA07G05990 N 0.000
ONIVA07G07540 Oryza nivara ONIVA07G07540 N 0.000
OPUNC01G36560 Oryza punctata OPUNC01G36560 N 0.000
OPUNC07G07180 Oryza punctata OPUNC07G07180 N 0.000
ORGLA01G0315200 Oryza glaberrima ORGLA01G0315200 N 0.000
ORGLA07G0062800 Oryza glaberrima ORGLA07G0062800 N 0.000
OMERI07G07070 Oryza meridionalis OMERI07G07070 N 0.000
ORUFI01G41050 Oryza rufipogon ORUFI01G41050 N 0.000
ORUFI07G07450 Oryza rufipogon ORUFI07G07450 N 0.000
ORUFI07G07460 Oryza rufipogon ORUFI07G07460 N 0.000
ORUFI07G08780 Oryza rufipogon ORUFI07G08780 N 0.000
OS01G0855400 Oryza sativa OS01G0855400 N 0.000
Sb01g013830 Sorghum bicolor Sb01g013830 N 0.000
Pavir.J13941 Panicum virgatum Pavir.J13941 N 0.000
BGIOSGA004824 Oryza indica BGIOSGA004824 N 0.000
OLONG_023640 Oryza longistaminata OLONG_023640 N 0.000
OLONG_021151 Oryza longistaminata OLONG_021151 N 0.000
OLONG_012136 Oryza longistaminata OLONG_012136 N 0.000
OGLUM07G07870 Oryza glumaepatula OGLUM07G07870 N 0.000
OGLUM07G07150 Oryza glumaepatula OGLUM07G07150 N 0.000
OBART07G08680 Oryza barthii OBART07G08680 N 0.000
OBART07G07450 Oryza barthii OBART07G07450 N 0.000
OBART07G07440 Oryza barthii OBART07G07440 N 0.000
OBART01G37720 Oryza barthii OBART01G37720 N 0.000
OB07G17380 Oryza brachyantha OB07G17380 N 0.000
OB01G46450 Oryza brachyantha OB01G46450 N 0.000
LPERR01G32380 Leersia perrieri LPERR01G32380 N 0.000
GRMZM2G121570 Zea mays GRMZM2G121570 N 0.000
BGIOSGA025449 Oryza indica BGIOSGA025449 N 0.000
BGIOSGA024590 Oryza indica BGIOSGA024590 N 0.000