Al_scaffold_0007_3741 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Al_scaffold_0007_3741 T252789_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.766 0.766
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0007_3741 MADS box 12 58

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU08634 Neurospora crassa NCU08634 D
PFICI_03083 Pestalotiopsis fici PFICI_03083 I
fgenesh1_pg.C_scaffold_4000918 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4000918 I
estExt_fgenesh3_pm.C_40010 Neurospora discreta estExt_fgenesh3_pm.C_40010 I
X797_002511 Metarhizium robertsii X797_002511 I
VHEMI05092 Torrubiella hemipterigena VHEMI05092 I
VDBG_09975 Verticillium alfalfae VDBG_09975 I
VDAG_06269 Verticillium dahliae VDAG_06269 I
UV8b_5959 Ustilaginoidea virens UV8b_5959 I
SMAC_09090 Sordaria macrospora SMAC_09090 I
SAPIO_CDS1284 Scedosporium apiospermum SAPIO_CDS1284 I
PODANS_1_230 Podospora anserina PODANS_1_230 I
VDBG_09975 Verticillium albo atrum VDBG_09975 I
NEUTE1DRAFT_127029 Neurospora tetrasperma NEUTE1DRAFT_127029 I
MYCTH_2307931 Myceliophthora thermophila MYCTH_2307931 I
MGU_09664 Metarhizium guizhouense MGU_09664 I
MBR_00157 Metarhizium brunneum MBR_00157 I
MANI_000381 Metarhizium anisopliae MANI_000381 I
MAJ_05920 Metarhizium majus MAJ_05920 I
CTHT_0074260 Chaetomium thermophilum CTHT_0074260 I
CHGG_02048 Chaetomium globosum CHGG_02048 I
MGG_01853 Magnaporthe oryzae MGG_01853 N
MAM_07413 Metarhizium album MAM_07413 N