CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGL82
(
Arabidopsis thaliana
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
AT5G58890
T252933_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G58890.1
MADS box
10
54
RIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKAT
Links
Other
MADS box
family TFs
Other
Arabidopsis thaliana
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g009300
Brassica oleracea
Bo2g009300
I
0.000
Bra028640
Brassica rapa
Bra028640
I
0.000
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.000
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.000
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.000
NAC082
Arabidopsis thaliana
AT5G09330
N
0.000
Bo3g005150
Brassica oleracea
Bo3g005150
N
0.000
Bra006019
Brassica rapa
Bra006019
N
0.000
Bra009379
Brassica rapa
Bra009379
N
0.000
VNI1
Arabidopsis lyrata
fgenesh2_kg.6__879__AT5G09330.2
N
0.000
Bostr.13129s0062
Boechera stricta
Bostr.13129s0062
N
0.000
Cagra.1365s0106
Capsella grandiflora
Cagra.1365s0106
N
0.000
Carubv10001139m.g
Capsella rubella
Carubv10001139m.g
N
0.000
Thhalv10013785m.g
Eutrema salsugineum
Thhalv10013785m.g
N
0.000