CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo7g003640
(
Brassica oleracea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bo7g003640
T253155_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo7g003640.1
MADS box
10
55
KIENVNSRQVTFSKSRNRLIKKANELSFLCEVDVIVFSSTVNVYYF
Links
Other
MADS box
family TFs
Other
Brassica oleracea
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mat1-Mc
Schizosaccharomyces pombe
SPBC23G7.09
D
0.000
M378DRAFT_176509
Amanita muscaria
M378DRAFT_176509
I
0.000
GALMADRAFT_133211
Galerina marginata
GALMADRAFT_133211
I
0.000
SCLCIDRAFT_6962
Scleroderma citrinum
SCLCIDRAFT_6962
I
0.000
GLOINDRAFT_44046
Rhizophagus irregularis
GLOINDRAFT_44046
I
0.000
GLOINDRAFT_50485
Rhizophagus irregularis
GLOINDRAFT_50485
I
0.000
GLOTRDRAFT_38143
Gloeophyllum trabeum
GLOTRDRAFT_38143
I
0.000
GLRG_04643
Colletotrichum graminicola
GLRG_04643
I
0.000
GYMLUDRAFT_71519
Gymnopus luxurians
GYMLUDRAFT_71519
I
0.000
JAAARDRAFT_113690
Jaapia argillacea
JAAARDRAFT_113690
I
0.000
SBOR_9074
Sclerotinia borealis
SBOR_9074
I
0.000
AUEXF2481DRAFT_37338
Aureobasidium subglaciale
AUEXF2481DRAFT_37338
I
0.000
M422DRAFT_111122
Sphaerobolus stellatus
M422DRAFT_111122
I
0.000
POSPLDRAFT_43059
Postia placenta
POSPLDRAFT_43059
I
0.000
POSPLDRAFT_104707
Postia placenta
POSPLDRAFT_104707
I
0.000
M422DRAFT_91926
Sphaerobolus stellatus
M422DRAFT_91926
I
0.000
M437DRAFT_74676
Aureobasidium melanogenum
M437DRAFT_74676
I
0.000
M438DRAFT_346080
Aureobasidium pullulans
M438DRAFT_346080
I
0.000
MANI_028883
Metarhizium anisopliae
MANI_028883
I
0.000
PGTG_16202
Puccinia graminis
PGTG_16202
I
0.000
PAXINDRAFT_137714
Paxillus involutus
PAXINDRAFT_137714
I
0.000
SERLA73DRAFT_18452
Serpula lacrymans
SERLA73DRAFT_18452
I
0.000
UHOR_02166
Ustilago hordei
UHOR_02166
I
0.000
SS1G_04006
Sclerotinia sclerotiorum
SS1G_04006
I
0.000
BN946_scf184994.g55
Trametes cinnabarina
BN946_scf184994.g55
I
0.000
mat3-Mc
Schizosaccharomyces pombe
SPMTR.04
I
0.000
CH063_09403
Colletotrichum higginsianum
CH063_09403
I
0.000
CSUB01_02050
Colletotrichum sublineola
CSUB01_02050
I
0.000
BGHDH14_bgh03211
Blumeria graminis
BGHDH14_bgh03211
I
0.000
mat3-Mc
Schizosaccharomyces pombe
SPBC1711.02
I
0.000
DICSQDRAFT_67430
Dichomitus squalens
DICSQDRAFT_67430
I
0.000
SJAG_05153
Schizosaccharomyces japonicus
SJAG_05153
I
0.000
F503_06490
Ophiostoma piceae uamh
F503_06490
I
0.000
FIBRA_02642
Fibroporia radiculosa
FIBRA_02642
I
0.000
FOMPIDRAFT_140591
Fomitopsis pinicola
FOMPIDRAFT_140591
I
0.000
FOMPIDRAFT_1081834
Fomitopsis pinicola
FOMPIDRAFT_1081834
I
0.000
Genemark.3077_g
Heterobasidion annosum
Genemark.3077_g
N
0.000
PAXRUDRAFT_55546
Paxillus rubicundulus
PAXRUDRAFT_55546
N
0.000
PHLGIDRAFT_121875
Phlebiopsis gigantea
PHLGIDRAFT_121875
N
0.000
PHSY_001785
Pseudozyma hubeiensis
PHSY_001785
N
0.000
PIIN_01319
Piriformospora indica
PIIN_01319
N
0.000
AGABI2DRAFT_192530
Agaricus bisporus
AGABI2DRAFT_192530
N
0.000
UM06025
Ustilago maydis
UM06025
N
0.000
PAN0_018c5621
Pseudozyma antarctica
PAN0_018c5621
N
0.000
UHOR_08562
Ustilago hordei
UHOR_08562
N
0.000
PILCRDRAFT_57544
Piloderma croceum
PILCRDRAFT_57544
N
0.000
PISMIDRAFT_80640
Pisolithus microcarpus
PISMIDRAFT_80640
N
0.000
PSEUBRA_SCAF20g03099
Pseudozyma brasiliensis
PSEUBRA_SCAF20g03099
N
0.000
sr16650
Sporisorium reilianum
sr16650
N
0.000
RHTO_05563
Rhodosporidium toruloides
RHTO_05563
N
0.000
RHTO_08065
Rhodosporidium toruloides
RHTO_08065
N
0.000
RTG_00382
Rhodotorula glutinis
RTG_00382
N
0.000
RTG_02343
Rhodotorula glutinis
RTG_02343
N
0.000
SCHCODRAFT_107892
Schizophyllum commune
SCHCODRAFT_107892
N
0.000
SCHCODRAFT_255090
Schizophyllum commune
SCHCODRAFT_255090
N
0.000
SCHCODRAFT_255799
Schizophyllum commune
SCHCODRAFT_255799
N
0.000
SCLCIDRAFT_11527
Scleroderma citrinum
SCLCIDRAFT_11527
N
0.000
CY34DRAFT_56447
Suillus luteus
CY34DRAFT_56447
N
0.000
J056_002105
Wallemia ichthyophaga
J056_002105
N
0.000
HETIRDRAFT_476671
Heterobasidion irregulare
HETIRDRAFT_476671
N
0.000
GYMLUDRAFT_43821
Gymnopus luxurians
GYMLUDRAFT_43821
N
0.000
GLOINDRAFT_26890
Rhizophagus irregularis
GLOINDRAFT_26890
N
0.000
GALMADRAFT_227034
Galerina marginata
GALMADRAFT_227034
N
0.000
FOMPIDRAFT_1124101
Fomitopsis pinicola
FOMPIDRAFT_1124101
N
0.000
E5Q_02264
Mixia osmundae
E5Q_02264
N
0.000
CY34DRAFT_811615
Suillus luteus
CY34DRAFT_811615
N
0.000
K443DRAFT_1017
Laccaria amethystina
K443DRAFT_1017
N
0.000
CERSUDRAFT_61596
Ceriporiopsis subvermispora
CERSUDRAFT_61596
N
0.000
CERSUDRAFT_123639
Ceriporiopsis subvermispora
CERSUDRAFT_123639
N
0.000
CERSUDRAFT_118953
Ceriporiopsis subvermispora
CERSUDRAFT_118953
N
0.000
CC1G_07392
Coprinopsis cinerea
CC1G_07392
N
0.000
BOTBODRAFT_99971
Botryobasidium botryosum
BOTBODRAFT_99971
N
0.000
BN946_scf184994.g60
Trametes cinnabarina
BN946_scf184994.g60
N
0.000
BN946_scf184844.g19
Trametes cinnabarina
BN946_scf184844.g19
N
0.000
M422DRAFT_146751
Sphaerobolus stellatus
M422DRAFT_146751
N
0.000
PaG_02426
Pseudozyma aphidis
PaG_02426
N
0.000
MVLG_04557
Microbotryum violaceum
MVLG_04557
N
0.000
MVLG_04343
Microbotryum violaceum
MVLG_04343
N
0.000
MVLG_00343
Microbotryum violaceum
MVLG_00343
N
0.000
Moror_9029
Moniliophthora roreri
Moror_9029
N
0.000
Moror_11417
Moniliophthora roreri
Moror_11417
N
0.000
MELLADRAFT_94219
Melampsora laricipopulina
MELLADRAFT_94219
N
0.000
M422DRAFT_195883
Sphaerobolus stellatus
M422DRAFT_195883
N
0.000
PaG_05617
Pseudozyma aphidis
PaG_05617
N
0.000
M422DRAFT_126587
Sphaerobolus stellatus
M422DRAFT_126587
N
0.000
M422DRAFT_121750
Sphaerobolus stellatus
M422DRAFT_121750
N
0.000
M422DRAFT_114792
Sphaerobolus stellatus
M422DRAFT_114792
N
0.000
M413DRAFT_47178
Hebeloma cylindrosporum
M413DRAFT_47178
N
0.000
M408DRAFT_20648
Serendipita vermifera
M408DRAFT_20648
N
0.000
M404DRAFT_551810
Pisolithus tinctorius
M404DRAFT_551810
N
0.000
LACBIDRAFT_386478
Laccaria bicolor
LACBIDRAFT_386478
N
0.000