LELG_04554 (Lodderomyces elongisporus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 LELG_04554 T254513_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.708 0.708
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDK46373 MADS box 10 57

Links

Other MADS box family TFs
Other Lodderomyces elongisporus TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMP1 Saccharomyces cerevisiae YBR182C D 0.708
LALA0_S04e02938g Lachancea lanzarotensis LALA0_S04e02938g I 0.729
KNAG_0A01830 Kazachstania naganishii KNAG_0A01830 I 0.708
M437DRAFT_42083 Aureobasidium melanogenum M437DRAFT_42083 I 0.708
M438DRAFT_316511 Aureobasidium pullulans M438DRAFT_316511 I 0.708
NCAS_0C01980 Naumovozyma castellii NCAS_0C01980 I 0.750
NDAI_0E02700 Naumovozyma dairenensis NDAI_0E02700 I 0.729
PAS_chr4_0093 Komagataella pastoris PAS_chr4_0093 I 0.750
PGUG_02571 Meyerozyma guilliermondii PGUG_02571 I 0.792
PICST_68747 Scheffersomyces stipitis PICST_68747 I 0.896
SKUD_178506 Saccharomyces kudriavzevii SKUD_178506 I 0.708
TDEL_0A05090 Torulaspora delbrueckii TDEL_0A05090 I 0.729
ZYRO0A13464g Zygosaccharomyces rouxii ZYRO0A13464g I 0.708
estExt_genewise1_human.C_chr_1.10329 Pichia stipitis estExt_genewise1_human.C_chr_1.10329 I 0.896
Scas_Contig664.4 Saccharomyces castellii Scas_Contig664.4 I 0.750
1645_YBR182C Saccharomyces bayanus 1645_YBR182C I 0.708
1735_Multiple Saccharomyces paradoxus 1735_Multiple I 0.708
572_YBR182C Saccharomyces mikatae 572_YBR182C I 0.708
KLTH0E13156g Kluyveromyces thermotolerans KLTH0E13156g I 0.708
SAKL0H09416g Lachancea kluyveri SAKL0H09416g I 0.750
XP_002493499.1 Pichia pastoris XP_002493499.1 I 0.750
DEHA2B02882g Debaryomyces hansenii DEHA2B02882g I 0.896
CPAG_01728 Candida parapsilosis CPAG_01728 I 0.875
PGUG_02571 Candida guilliermondii PGUG_02571 I 0.792
AGOS_AGR198C Ashbya gossypii AGOS_AGR198C I 0.792
CANTEDRAFT_125008 Candida tenuis CANTEDRAFT_125008 I 0.875
CaO19.12132 Candida albicans CaO19.12132 I 0.875
CaO19.4662 Candida albicans CaO19.4662 I 0.875
CD36_41250 Candida dubliniensis CD36_41250 I 0.854
CLUG_04340 Clavispora lusitaniae CLUG_04340 I 0.917
CORT_0E04370 Candida orthopsilosis CORT_0E04370 I 0.854
CTRG_00027 Candida tropicalis CTRG_00027 I 0.896
CLUG_04340 Candida lusitaniae CLUG_04340 I 0.917
Ecym_7060 Eremothecium cymbalariae Ecym_7060 I 0.792
G210_1171 Candida maltosa G210_1171 I 0.833
GNLVRS01_PISO0M22936g Millerozyma farinosa GNLVRS01_PISO0M22936g I 0.812
GNLVRS01_PISO0N23201g Millerozyma farinosa GNLVRS01_PISO0N23201g I 0.833
HPODL_00493 Ogataea parapolymorpha HPODL_00493 I 0.708
JL09_g2233 Pichia kudriavzevii JL09_g2233 I 0.771
KAFR_0E00800 Kazachstania africana KAFR_0E00800 I 0.708
KLLA0_E24025g Kluyveromyces lactis KLLA0_E24025g I 0.729
KLTH0E13156g Lachancea thermotolerans KLTH0E13156g I 0.708