CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400036527
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400036527
T255675_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400086956
MADS box
10
58
FIENNTERRVSYRKRQKGFLTKARELNTLCDVELATLINSPYHNEPEVF
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BZIP60
Arabidopsis thaliana
AT1G42990
D
ATBZIP60
Arabidopsis lyrata
fgenesh2_kg.1__3703__AT1G42990.1
I
Bostr.12302s0013
Boechera stricta
Bostr.12302s0013
I
Cagra.2795s0001
Capsella grandiflora
Cagra.2795s0001
I
Carubv10009864m.g
Capsella rubella
Carubv10009864m.g
I
Thhalv10004635m.g
Eutrema salsugineum
Thhalv10004635m.g
I
Ca_20172
Cicer arietinum
Ca_20172
N