CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400040285
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400040285
T255702_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400090714
MADS box
3
50
LIESESARMVSFSKRKKTLFQDANKFATQTGANVGVMLFSPSGRPFSY
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPMAG00000002651
Petromyzon marinus
ENSPMAG00000002651
N
Aan_R002070
Calypte anna
Aan_R002070
N
Afo_R003546
Aptenodytes forsteri
Afo_R003546
N
Brh_R012746
Buceros rhinoceros
Brh_R012746
N
Gfo_R011523
Geospiza fortis
Gfo_R011523
N
Tal_R000558
Tyto alba
Tal_R000558
N
e_gw.590.38.1
Branchiostoma floridae
e_gw.590.38.1
N
gw.241.99.1
Branchiostoma floridae
gw.241.99.1
N