scaffold_202161.1 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 scaffold_202161.1 T256114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_202161.1 MADS box 53 100

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NEUROD1 Homo sapiens ENSG00000162992 D
Neurod1 Mus musculus ENSMUSG00000034701 D
CapteG111699 Capitella teleta CapteG111699 I
CapteG169232 Capitella teleta CapteG169232 I
CGI_10016130 Crassostrea gigas CGI_10016130 I
NEUROD6 Anolis carolinensis ENSACAG00000009699 I
NEUROD4 Anolis carolinensis ENSACAG00000014910 I
ENSAMEG00000018597 Ailuropoda melanoleuca ENSAMEG00000018597 I
ENSAMEG00000019191 Ailuropoda melanoleuca ENSAMEG00000019191 I
ENSAMEG00000019439 Ailuropoda melanoleuca ENSAMEG00000019439 I
ENSAMXG00000001281 Astyanax mexicanus ENSAMXG00000001281 I
ENSAMXG00000014944 Astyanax mexicanus ENSAMXG00000014944 I
ENSAMXG00000026481 Astyanax mexicanus ENSAMXG00000026481 I
ENSAMXG00000026500 Astyanax mexicanus ENSAMXG00000026500 I
ENSAPLG00000001566 Anas platyrhynchos ENSAPLG00000001566 I
ENSAPLG00000009187 Anas platyrhynchos ENSAPLG00000009187 I
NEUROD6 Bos taurus ENSBTAG00000000558 I
NEUROD1 Bos taurus ENSBTAG00000001755 I
NEUROD4 Bos taurus ENSBTAG00000005626 I
NEUROD6 Canis familiaris ENSCAFG00000003122 I
NEUROD4 Canis familiaris ENSCAFG00000006347 I
NEUROD6 Callithrix jacchus ENSCJAG00000008997 I
NEUROD1 Callithrix jacchus ENSCJAG00000011529 I
NEUROD4 Callithrix jacchus ENSCJAG00000019123 I
NEUROD4 Cavia porcellus ENSCPOG00000002913 I
NEUROD6 Cavia porcellus ENSCPOG00000006406 I
NEUROD1 Cavia porcellus ENSCPOG00000025248 I
ENSCSAG00000018652 Chlorocebus sabaeus ENSCSAG00000018652 I
ENSCSAG00000019605 Chlorocebus sabaeus ENSCSAG00000019605 I
neurod4 Danio rerio ENSDARG00000003469 I
neurod1 Danio rerio ENSDARG00000019566 I
neurod6b Danio rerio ENSDARG00000020794 I
neurod6a Danio rerio ENSDARG00000040008 I
NEUROD4 Dasypus novemcinctus ENSDNOG00000009650 I
NEUROD1 Dasypus novemcinctus ENSDNOG00000012297 I
NEUROD6 Dasypus novemcinctus ENSDNOG00000014272 I
ENSDORG00000012142 Dipodomys ordii ENSDORG00000012142 I
NEUROD4 Equus caballus ENSECAG00000001002 I
NEUROD1 Equus caballus ENSECAG00000012181 I
NEUROD6 Equus caballus ENSECAG00000020776 I
NEUROD6 Erinaceus europaeus ENSEEUG00000007073 I
NEUROD4 Echinops telfairi ENSETEG00000009519 I
NEUROD1 Echinops telfairi ENSETEG00000018112 I
ENSFALG00000014089 Ficedula albicollis ENSFALG00000014089 I
ENSFALG00000015099 Ficedula albicollis ENSFALG00000015099 I
ENSFALG00000015273 Ficedula albicollis ENSFALG00000015273 I
NEUROD1 Felis catus ENSFCAG00000004553 I
NEUROD4 Felis catus ENSFCAG00000013284 I
NEUROD6 Felis catus ENSFCAG00000026161 I
NEUROD4 Homo sapiens ENSG00000123307 I
NEUROD6 Homo sapiens ENSG00000164600 I
NEUROD4 Gasterosteus aculeatus ENSGACG00000000702 I
neurod1 Gasterosteus aculeatus ENSGACG00000002064 I
neurod2 Gasterosteus aculeatus ENSGACG00000006028 I
neurod4 Gasterosteus aculeatus ENSGACG00000008952 I
neurod6b Gasterosteus aculeatus ENSGACG00000017176 I
NEUROD1 Gallus gallus ENSGALG00000008908 I
ENSGALG00000012235 Gallus gallus ENSGALG00000012235 I
ENSGALG00000024396 Gallus gallus ENSGALG00000024396 I
NEUROD4 Gorilla gorilla ENSGGOG00000004295 I
NEUROD6 Gorilla gorilla ENSGGOG00000026908 I
NEUROD1 Gorilla gorilla ENSGGOG00000027940 I
ENSGMOG00000000887 Gadus morhua ENSGMOG00000000887 I
ENSGMOG00000006899 Gadus morhua ENSGMOG00000006899 I
ENSGMOG00000007437 Gadus morhua ENSGMOG00000007437 I
ENSGMOG00000009610 Gadus morhua ENSGMOG00000009610 I
ENSGMOG00000014666 Gadus morhua ENSGMOG00000014666 I
ENSGMOG00000017265 Gadus morhua ENSGMOG00000017265 I
ENSLACG00000002237 Latimeria chalumnae ENSLACG00000002237 I
ENSLACG00000013009 Latimeria chalumnae ENSLACG00000013009 I
ENSLACG00000013264 Latimeria chalumnae ENSLACG00000013264 I
NEUROD1 Loxodonta africana ENSLAFG00000000612 I
NEUROD6 Loxodonta africana ENSLAFG00000018034 I
NEUROD4 Loxodonta africana ENSLAFG00000029446 I
ENSLOCG00000012935 Lepisosteus oculatus ENSLOCG00000012935 I
ENSLOCG00000017829 Lepisosteus oculatus ENSLOCG00000017829 I
ENSLOCG00000018210 Lepisosteus oculatus ENSLOCG00000018210 I
ENSMEUG00000016098 Macropus eugenii ENSMEUG00000016098 I
NEUROD4 Meleagris gallopavo ENSMGAG00000005085 I
NEUROD6 Meleagris gallopavo ENSMGAG00000012144 I
NEUROD4 Microcebus murinus ENSMICG00000008491 I
ENSMICG00000012663 Microcebus murinus ENSMICG00000012663 I
NEUROD6 Microcebus murinus ENSMICG00000012974 I
NEUROD6 Myotis lucifugus ENSMLUG00000017761 I
NEUROD1 Myotis lucifugus ENSMLUG00000025259 I
NEUROD4 Myotis lucifugus ENSMLUG00000028491 I
ENSMMUG00000002604 Macaca mulatta ENSMMUG00000002604 I
NEUROD1 Macaca mulatta ENSMMUG00000008296 I
NEUROD6 Macaca mulatta ENSMMUG00000022699 I
NEUROD1 Monodelphis domestica ENSMODG00000010392 I
NEUROD6 Monodelphis domestica ENSMODG00000013299 I
ENSMPUG00000005372 Mustela putorius furo ENSMPUG00000005372 I
ENSMPUG00000018960 Mustela putorius furo ENSMPUG00000018960 I
ENSMPUG00000019108 Mustela putorius furo ENSMPUG00000019108 I
Neurod6 Mus musculus ENSMUSG00000037984 I
Neurod4 Mus musculus ENSMUSG00000048015 I
ENSNLEG00000006322 Nomascus leucogenys ENSNLEG00000006322 I
ENSNLEG00000015231 Nomascus leucogenys ENSNLEG00000015231 I
ENSNLEG00000017618 Nomascus leucogenys ENSNLEG00000017618 I
NEUROD1 Ornithorhynchus anatinus ENSOANG00000003630 I
NEUROD6 Ornithorhynchus anatinus ENSOANG00000011606 I
NEUROD4 Ornithorhynchus anatinus ENSOANG00000011626 I
ENSOARG00000008435 Ovis aries ENSOARG00000008435 I
ENSOARG00000018394 Ovis aries ENSOARG00000018394 I
NEUROD6 Otolemur garnettii ENSOGAG00000001911 I
NEUROD4 Otolemur garnettii ENSOGAG00000009685 I
NEUROD1 Otolemur garnettii ENSOGAG00000025613 I
ENSONIG00000006878 Oreochromis niloticus ENSONIG00000006878 I
ENSONIG00000009263 Oreochromis niloticus ENSONIG00000009263 I
ENSONIG00000020540 Oreochromis niloticus ENSONIG00000020540 I
ENSONIG00000020663 Oreochromis niloticus ENSONIG00000020663 I
ENSONIG00000021173 Oreochromis niloticus ENSONIG00000021173 I
ENSONIG00000021273 Oreochromis niloticus ENSONIG00000021273 I
NEUROD6 Ochotona princeps ENSOPRG00000006565 I
NEUROD1 Ochotona princeps ENSOPRG00000008607 I
neurod4 Oryzias latipes ENSORLG00000007467 I
neurod2 Oryzias latipes ENSORLG00000008303 I
neurod1 Oryzias latipes ENSORLG00000010563 I
neurod6b Oryzias latipes ENSORLG00000017789 I
ENSORLG00000019867 Oryzias latipes ENSORLG00000019867 I
ENSPANG00000007303 Papio anubis ENSPANG00000007303 I
ENSPANG00000024988 Papio anubis ENSPANG00000024988 I
NEUROD4 Procavia capensis ENSPCAG00000002075 I
NEUROD6 Procavia capensis ENSPCAG00000005309 I
NEUROD1 Procavia capensis ENSPCAG00000008927 I
ENSPFOG00000005949 Poecilia formosa ENSPFOG00000005949 I
ENSPFOG00000008824 Poecilia formosa ENSPFOG00000008824 I
ENSPFOG00000014944 Poecilia formosa ENSPFOG00000014944 I
ENSPFOG00000020285 Poecilia formosa ENSPFOG00000020285 I
ENSPFOG00000020401 Poecilia formosa ENSPFOG00000020401 I
ENSPMAG00000007548 Petromyzon marinus ENSPMAG00000007548 I
ENSPPYG00000004613 Pongo abelii ENSPPYG00000004613 I
ENSPPYG00000017666 Pongo abelii ENSPPYG00000017666 I
ENSPPYG00000029484 Pongo abelii ENSPPYG00000029484 I
ENSPSIG00000000416 Pelodiscus sinensis ENSPSIG00000000416 I
ENSPSIG00000001006 Pelodiscus sinensis ENSPSIG00000001006 I
ENSPSIG00000001952 Pelodiscus sinensis ENSPSIG00000001952 I
NEUROD4 Pan troglodytes ENSPTRG00000005049 I
NEUROD1 Pan troglodytes ENSPTRG00000012702 I
NEUROD6 Pan troglodytes ENSPTRG00000019050 I
NEUROD6 Pteropus vampyrus ENSPVAG00000014789 I
Neurod1 Rattus norvegicus ENSRNOG00000005609 I
Neurod4 Rattus norvegicus ENSRNOG00000008449 I
Neurod6 Rattus norvegicus ENSRNOG00000026055 I
NEUROD1 Sorex araneus ENSSARG00000008648 I
ENSSHAG00000008330 Sarcophilus harrisii ENSSHAG00000008330 I
ENSSHAG00000009773 Sarcophilus harrisii ENSSHAG00000009773 I
ENSSHAG00000015217 Sarcophilus harrisii ENSSHAG00000015217 I
ENSSSCG00000000300 Sus scrofa ENSSSCG00000000300 I
NEUROD1 Sus scrofa ENSSSCG00000016011 I
ENSSTOG00000002956 Ictidomys tridecemlineatus ENSSTOG00000002956 I
ENSSTOG00000019627 Ictidomys tridecemlineatus ENSSTOG00000019627 I
ENSSTOG00000024443 Ictidomys tridecemlineatus ENSSTOG00000024443 I
NEUROD4 Tupaia belangeri ENSTBEG00000000432 I
NEUROD6 Tupaia belangeri ENSTBEG00000013747 I
NEUROD6 Taeniopygia guttata ENSTGUG00000001910 I
NEUROD4 Taeniopygia guttata ENSTGUG00000003762 I
NEUROD4 Tetraodon nigroviridis ENSTNIG00000000015 I
neurod2 Tetraodon nigroviridis ENSTNIG00000001440 I
neurod4 Tetraodon nigroviridis ENSTNIG00000002442 I
neurod1 Tetraodon nigroviridis ENSTNIG00000003533 I
neurod6b Takifugu rubripes ENSTRUG00000000001 I
neurod2 Takifugu rubripes ENSTRUG00000000599 I
neurod2 Takifugu rubripes ENSTRUG00000012238 I
neurod6b Takifugu rubripes ENSTRUG00000012378 I
neurod4 Takifugu rubripes ENSTRUG00000013273 I
NEUROD4 Takifugu rubripes ENSTRUG00000013677 I
neurod1 Takifugu rubripes ENSTRUG00000014252 I
ENSTSYG00000003704 Tarsius syrichta ENSTSYG00000003704 I
ENSTSYG00000012547 Tarsius syrichta ENSTSYG00000012547 I
NEUROD6 Tursiops truncatus ENSTTRG00000000347 I
NEUROD4 Tursiops truncatus ENSTTRG00000016039 I
NEUROD1 Tursiops truncatus ENSTTRG00000016757 I
NEUROD4 Vicugna pacos ENSVPAG00000012065 I
ENSXMAG00000001517 Xiphophorus maculatus ENSXMAG00000001517 I
ENSXMAG00000011061 Xiphophorus maculatus ENSXMAG00000011061 I
ENSXMAG00000019613 Xiphophorus maculatus ENSXMAG00000019613 I
ENSXMAG00000019847 Xiphophorus maculatus ENSXMAG00000019847 I
ENSXMAG00000020272 Xiphophorus maculatus ENSXMAG00000020272 I
HelroG70666 Helobdella robusta HelroG70666 I
LotgiG59712 Lottia gigantea LotgiG59712 I
SMAR012298 Strigamia maritima SMAR012298 I
SPU_024918 Strongylocentrotus purpuratus SPU_024918 I
Aan_R004820 Calypte anna Aan_R004820 I
Aan_R008719 Calypte anna Aan_R008719 I
Aan_R011092 Calypte anna Aan_R011092 I
Afo_R007497 Aptenodytes forsteri Afo_R007497 I
Afo_R010643 Aptenodytes forsteri Afo_R010643 I
Alligator_sinensis_CCG005119.1 Alligator sinensis Alligator_sinensis_CCG005119.1 I
Alligator_sinensis_CCG009407.1 Alligator sinensis Alligator_sinensis_CCG009407.1 I
Alligator_sinensis_CCG020348.1 Alligator sinensis Alligator_sinensis_CCG020348.1 I
Brh_R011298 Buceros rhinoceros Brh_R011298 I
Cmyd_10009140 Chelonia mydas Cmyd_10009140 I
Cmyd_10010338 Chelonia mydas Cmyd_10010338 I
ENSBTAP00000000728-D1 Bos grunniens ENSBTAP00000000728-D1 I
ENSBTAP00000002301-D1 Bos grunniens ENSBTAP00000002301-D1 I
ENSP00000242994-D1 Bos grunniens ENSP00000242994-D1 I
ENSP00000242994 Macaca fascicularis ENSP00000242994 I
ENSP00000295108 Macaca fascicularis ENSP00000295108 I
ENSP00000297142 Macaca fascicularis ENSP00000297142 I
Gfo_R001419 Geospiza fortis Gfo_R001419 I
Gfo_R005849 Geospiza fortis Gfo_R005849 I
Myotis_brandtii_NEUROD1_10035039 Myotis brandtii Myotis_brandtii_NEUROD1_10035039 I
Myotis_brandtii_NEUROD4_10003502 Myotis brandtii Myotis_brandtii_NEUROD4_10003502 I
Myotis_brandtii_NEUROD6_10033978 Myotis brandtii Myotis_brandtii_NEUROD6_10033978 I
Ogr05448 Ophisaurus gracilis Ogr05448 I
Ogr07339 Ophisaurus gracilis Ogr07339 I
Ogr14107 Ophisaurus gracilis Ogr14107 I
Pvit_05839 Pogona vitticeps Pvit_05839 I
Pvit_17470 Pogona vitticeps Pvit_17470 I
Tal_R006127 Tyto alba Tal_R006127 I
gw.499.29.1 Branchiostoma floridae gw.499.29.1 I
Sakowv30011934m.g Saccoglossus kowalevskii Sakowv30011934m.g I
2111505A Xenopus laevis 2111505A I
AAY99628 Xenopus tropicalis AAY99628 I
neurod1.L Xenopus laevis XB-GENE-6252655 I
neurod1 Xenopus tropicalis XB-GENE-963757 I
neurod1.S Xenopus laevis XB-GENE-963762 I
neurod6 Xenopus tropicalis XB-GENE-969227 I
neurod6.L Xenopus laevis XB-GENE-969232 I
neurod4 Xenopus tropicalis XB-GENE-972704 I
neurod4.L Xenopus laevis XB-GENE-972708 I
BGLB013872 Biomphalaria glabrata BGLB013872 I
CBG21175 Caenorhabditis briggsae CBG21175 N