scaffold_202161.1 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 scaffold_202161.1 T256114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_202161.1 MADS box 53 100

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G72350 Arabidopsis thaliana AT1G72350 N 0.896
Cagra.1013s0063 Capsella grandiflora Cagra.1013s0063 N 0.875
Carubv10021825m.g Capsella rubella Carubv10021825m.g N 0.875
Bo6g091550 Brassica oleracea Bo6g091550 N 0.854
Bra003884 Brassica rapa Bra003884 N 0.854
Bostr.10273s0116 Boechera stricta Bostr.10273s0116 N 0.854
Thhalv10019133m.g Eutrema salsugineum Thhalv10019133m.g N 0.833
Bo6g115840 Brassica oleracea Bo6g115840 N 0.812
AT1G17310 Arabidopsis thaliana AT1G17310 N 0.729
Cagra.0824s0100 Capsella grandiflora Cagra.0824s0100 N 0.729
Carubv10011075m.g Capsella rubella Carubv10011075m.g N 0.729
Bostr.7128s0342 Boechera stricta Bostr.7128s0342 N 0.708