Carubv10021825m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10021825m.g T257806_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10021825m MADS box 47 94

Links

Other MADS box family TFs
Other Capsella rubella TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1013s0063 Capsella grandiflora Cagra.1013s0063 N 1.000
Bo6g091550 Brassica oleracea Bo6g091550 N 0.896
Bra003884 Brassica rapa Bra003884 N 0.896
scaffold_202161.1 Arabidopsis lyrata scaffold_202161.1 N 0.875
AT1G72350 Arabidopsis thaliana AT1G72350 N 0.875
Bostr.10273s0116 Boechera stricta Bostr.10273s0116 N 0.854
Thhalv10019133m.g Eutrema salsugineum Thhalv10019133m.g N 0.854
Bo6g115840 Brassica oleracea Bo6g115840 N 0.833
Carubv10011075m.g Capsella rubella Carubv10011075m.g N 0.729
Bostr.7128s0342 Boechera stricta Bostr.7128s0342 N 0.729
Cagra.0824s0100 Capsella grandiflora Cagra.0824s0100 N 0.729
fgenesh2_kg.1__1889__AT1G17310.1 Arabidopsis lyrata fgenesh2_kg.1__1889__AT1G17310.1 N 0.708
AT1G17310 Arabidopsis thaliana AT1G17310 N 0.708