fgenesh2_kg.1__1889__AT1G17310.1 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 fgenesh2_kg.1__1889__AT1G17310.1 T254012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__1889__AT1G17310.1 MADS box 50 97

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G17310 Arabidopsis thaliana AT1G17310 N 0.958
Bostr.7128s0342 Boechera stricta Bostr.7128s0342 N 0.917
Cagra.0824s0100 Capsella grandiflora Cagra.0824s0100 N 0.896
Carubv10011075m.g Capsella rubella Carubv10011075m.g N 0.896
Bo8g104960 Brassica oleracea Bo8g104960 N 0.833
Bra026674 Brassica rapa Bra026674 N 0.833
Thhalv10009669m.g Eutrema salsugineum Thhalv10009669m.g N 0.812
Bo6g115840 Brassica oleracea Bo6g115840 N 0.750
AT1G72350 Arabidopsis thaliana AT1G72350 N 0.729
Bo6g091550 Brassica oleracea Bo6g091550 N 0.729
Bra003884 Brassica rapa Bra003884 N 0.729
Bostr.10273s0116 Boechera stricta Bostr.10273s0116 N 0.708
Cagra.1013s0063 Capsella grandiflora Cagra.1013s0063 N 0.708
Carubv10021825m.g Capsella rubella Carubv10021825m.g N 0.708