CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm026039
(
Prunus mume
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pm026039
T257087_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm026039
MADS box
10
58
WIVNDAARKATLRKRRANLLKKLRELTILCDVNGLIIVYGPDSDEPVVW
Links
Other
MADS box
family TFs
Other
Prunus mume
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HMS1
Saccharomyces cerevisiae
YOR032C
D
SU7_3203
Saccharomyces arboricola
SU7_3203
I
KLTH0E02376g
Kluyveromyces thermotolerans
KLTH0E02376g
I
23114_YOR032C
Saccharomyces bayanus
23114_YOR032C
I
20426_YOR032C
Saccharomyces paradoxus
20426_YOR032C
I
20073_Multiple
Saccharomyces mikatae
20073_Multiple
I
ZYRO0G15972g
Zygosaccharomyces rouxii
ZYRO0G15972g
I
ZBAI_08029
Zygosaccharomyces bailii
ZBAI_08029
I
ZBAI_02175
Zygosaccharomyces bailii
ZBAI_02175
I
TDEL_0A04900
Torulaspora delbrueckii
TDEL_0A04900
I
LALA0_S05e02850g
Lachancea lanzarotensis
LALA0_S05e02850g
I
KUCA_T00002265001
Kuraishia capsulata
KUCA_T00002265001
I
KLTH0E02376g
Lachancea thermotolerans
KLTH0E02376g
I
Ecym_1333
Eremothecium cymbalariae
Ecym_1333
I
AGOS_AER385C
Ashbya gossypii
AGOS_AER385C
I
AACERI_AaceriAER385C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAER385C
I
CLUG_00757
Candida lusitaniae
CLUG_00757
N
GNLVRS01_PISO0D07923g
Millerozyma farinosa
GNLVRS01_PISO0D07923g
N
GNLVRS01_PISO0C07856g
Millerozyma farinosa
GNLVRS01_PISO0C07856g
N
CLUG_00757
Clavispora lusitaniae
CLUG_00757
N