CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_43.109
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_43.109
T258250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_43.109
MADS box
12
62
RETKEQRAVTFSKRRRGLFNKAAELCVLCDFQVAVLVSSPNPAKLNKFYTF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.2.1101.1
Mucor circinelloides
e_gw1.2.1101.1
I
PAXRUDRAFT_829045
Paxillus rubicundulus
PAXRUDRAFT_829045
I
PFICI_14124
Pestalotiopsis fici
PFICI_14124
I
PIIN_00796
Piriformospora indica
PIIN_00796
I
PSEUBRA_SCAF3g03688
Pseudozyma brasiliensis
PSEUBRA_SCAF3g03688
I
SBOR_8145
Sclerotinia borealis
SBOR_8145
I
SS1G_05588
Sclerotinia sclerotiorum
SS1G_05588
I
TRV_05844
Trichophyton verrucosum
TRV_05844
I
UREG_04511
Uncinocarpus reesii
UREG_04511
I
V499_08986
Pseudogymnoascus pannorum
V499_08986
I
VDAG_01770
Verticillium dahliae
VDAG_01770
I
WALSEDRAFT_9958
Wallemia sebi
WALSEDRAFT_9958
I
e_gw1.1.687.1
Phycomyces blakesleeanus
e_gw1.1.687.1
I
OIDMADRAFT_123333
Oidiodendron maius
OIDMADRAFT_123333
I
e_gw1.4.1161.1
Mucor circinelloides
e_gw1.4.1161.1
I
e_gw1.6.1281.1
Mucor circinelloides
e_gw1.6.1281.1
I
estExt_fgeneshMC_pm.C_40429
Mucor circinelloides
estExt_fgeneshMC_pm.C_40429
I
fgeneshPB_pg.1__662
Phycomyces blakesleeanus
fgeneshPB_pg.1__662
I
gw1.27.105.1
Phycomyces blakesleeanus
gw1.27.105.1
I
gw1.3.516.1
Phycomyces blakesleeanus
gw1.3.516.1
I
gw1.5.917.1
Mucor circinelloides
gw1.5.917.1
I
gw1.8.565.1
Mucor circinelloides
gw1.8.565.1
I
LDEC007646
Leptinotarsa decemlineata
LDEC007646
I
PredSwiss_CON2346.1
Pneumocystis carinii
PredSwiss_CON2346.1
I
EDP41437.1
Malassezia globosa
EDP41437.1
I
estExt_fgenesh1_pm.C_50209
Cryphonectria parasitica
estExt_fgenesh1_pm.C_50209
I
CTHT_0012860
Chaetomium thermophilum
CTHT_0012860
I
RO3G_06121
Rhizopus oryzae
RO3G_06121
I
RO3G_11614
Rhizopus oryzae
RO3G_11614
I
RO3G_15079
Rhizopus oryzae
RO3G_15079
I
SPPG_06208
Spizellomyces punctatus
SPPG_06208
I
ARB_02013
Arthroderma benhamiae
ARB_02013
I
Bcin09g06140
Botrytis cinerea
Bcin09g06140
I
BGHDH14_bgh04421
Blumeria graminis
BGHDH14_bgh04421
I
CFIO01_12657
Colletotrichum fioriniae
CFIO01_12657
I
CGGC5_4984
Colletotrichum gloeosporioides
CGGC5_4984
I
CH063_12904
Colletotrichum higginsianum
CH063_12904
I
Cob_05053
Colletotrichum orbiculare
Cob_05053
I
CSUB01_05290
Colletotrichum sublineola
CSUB01_05290
I
RO3G_00948
Rhizopus oryzae
RO3G_00948
I
DACRYDRAFT_57073
Dacryopinax sp
DACRYDRAFT_57073
I
E5Q_02524
Mixia osmundae
E5Q_02524
I
EV44_g1435
Erysiphe necator
EV44_g1435
I
GGTG_11623
Gaeumannomyces graminis
GGTG_11623
I
GLOINDRAFT_82941
Rhizophagus irregularis
GLOINDRAFT_82941
I
GLRG_02553
Colletotrichum graminicola
GLRG_02553
I
GMDG_07017
Pseudogymnoascus destructans
GMDG_07017
I
J056_002827
Wallemia ichthyophaga
J056_002827
I
M408DRAFT_79374
Serendipita vermifera
M408DRAFT_79374
I
MAPG_02274
Magnaporthe poae
MAPG_02274
I
MBM_07319
Marssonina brunnea
MBM_07319
I
MGG_02773
Magnaporthe oryzae
MGG_02773
I