CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_43.109
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_43.109
T258250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_43.109
MADS box
12
62
RETKEQRAVTFSKRRRGLFNKAAELCVLCDFQVAVLVSSPNPAKLNKFYTF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
vad-3
Neurospora crassa
NCU06407
D
CIMG_03889
Coccidioides immitis
CIMG_03889
I
MCYG_00925
Microsporum canis
MCYG_00925
I
SNOG_01260
Stagonospora nodorum
SNOG_01260
I
VDBG_06746
Verticillium albo atrum
VDBG_06746
I
A1O1_01044
Capronia coronata
A1O1_01044
I
A1O3_07508
Capronia epimyces
A1O3_07508
I
A1O5_04227
Cladophialophora psammophila
A1O5_04227
I
A1O7_00090
Cladophialophora yegresii
A1O7_00090
I
A1O9_05854
Exophiala aquamarina
A1O9_05854
I
ACRE_060270
Acremonium chrysogenum
ACRE_060270
I
AOL_s00006g245
Arthrobotrys oligospora
AOL_s00006g245
I
ARB_05650
Arthroderma benhamiae
ARB_05650
I
AUEXF2481DRAFT_41506
Aureobasidium subglaciale
AUEXF2481DRAFT_41506
I
BAUCODRAFT_60992
Baudoinia compniacensis
BAUCODRAFT_60992
I
BBA_02258
Beauveria bassiana
BBA_02258
I
BDDG_03042
Blastomyces dermatitidis
BDDG_03042
I
ACLA_028850
Aspergillus clavatus
CADACLAG00001924
I
CADAFLAG00011101
Aspergillus flavus
CADAFLAG00011101
I
AFUA_1G05740
Aspergillus fumigatus
CADAFUAG00009185
I
CADANGAG00013990
Aspergillus niger
CADANGAG00013990
I
ANIA_04096
Aspergillus nidulans
CADANIAG00004583
I
CADAORAG00003823
Aspergillus oryzae
CADAORAG00003823
I
ATEG_03051
Aspergillus terreus
CADATEAG00008253
I
NFIA_018990
Neosartorya fischeri
CADNFIAG00002142
I
CCM_07530
Cordyceps militaris
CCM_07530
I
CFIO01_13446
Colletotrichum fioriniae
CFIO01_13446
I
CGGC5_1863
Colletotrichum gloeosporioides
CGGC5_1863
I
CH063_11948
Colletotrichum higginsianum
CH063_11948
I
CHGG_05670
Chaetomium globosum
CHGG_05670
I
Cob_10120
Colletotrichum orbiculare
Cob_10120
I
COCC4DRAFT_134495
Bipolaris maydis
COCC4DRAFT_134495
I
COCCADRAFT_22142
Bipolaris zeicola
COCCADRAFT_22142
I
COCMIDRAFT_9880
Bipolaris oryzae
COCMIDRAFT_9880
I
COCSADRAFT_257479
Bipolaris sorokiniana
COCSADRAFT_257479
I
COCVIDRAFT_95336
Bipolaris victoriae
COCVIDRAFT_95336
I
CPC735_004550
Coccidioides posadasii
CPC735_004550
I
CPUR_04988
Claviceps purpurea
CPUR_04988
I
CSUB01_00446
Colletotrichum sublineola
CSUB01_00446
I
CTHT_0070590
Chaetomium thermophilum
CTHT_0070590
I
DOTSEDRAFT_117283
Dothistroma septosporum
DOTSEDRAFT_117283
I
DRE_02096
Drechslerella stenobrocha
DRE_02096
I
EPUS_05695
Endocarpon pusillum
EPUS_05695
I
EURHEDRAFT_417489
Aspergillus ruber
EURHEDRAFT_417489
I
EV44_g3192
Erysiphe necator
EV44_g3192
I
F503_01489
Ophiostoma piceae uamh
F503_01489
I
FFUJ_08637
Fusarium fujikuroi
FFUJ_08637
I
FGRRES_05503
Fusarium graminearum
FGRRES_05503
I
FOXG_09390
Fusarium oxysporum
FOXG_09390
I
FOXG_12539
Fusarium oxysporum
FOXG_12539
I
FOXG_12589
Fusarium oxysporum
FOXG_12589
I
FOXG_14000
Fusarium oxysporum
FOXG_14000
I
FOXG_14257
Fusarium oxysporum
FOXG_14257
I
FOXG_14422
Fusarium oxysporum
FOXG_14422
I
FOXG_15059
Fusarium oxysporum
FOXG_15059
I
FOXG_16414
Fusarium oxysporum
FOXG_16414
I
FOXG_17084
Fusarium oxysporum
FOXG_17084
I
FOXG_17123
Fusarium oxysporum
FOXG_17123
I
FOXG_17458
Fusarium oxysporum
FOXG_17458
I
FPSE_03500
Fusarium pseudograminearum
FPSE_03500
I
FVEG_07022
Fusarium verticillioides
FVEG_07022
I
G647_00099
Cladophialophora carrionii
G647_00099
I
GGTG_09510
Gaeumannomyces graminis
GGTG_09510
I
GLRG_00017
Colletotrichum graminicola
GLRG_00017
I
GMDG_06731
Pseudogymnoascus destructans
GMDG_06731
I
H072_10399
Dactylellina haptotyla
H072_10399
I
H101_06443
Trichophyton interdigitale
H101_06443
I
H102_07872
Trichophyton rubrum
H102_07872
I
H105_07898
Trichophyton soudanense
H105_07898
I
HCBG_06946
Histoplasma capsulatum
HCBG_06946
I
HMPREF1120_00724
Exophiala dermatitidis
HMPREF1120_00724
I
HMPREF1541_07706
Cyphellophora europaea
HMPREF1541_07706
I
HMPREF1624_03143
Sporothrix schenckii
HMPREF1624_03143
I
LEMA_P100560.1
Leptosphaeria maculans
LEMA_P100560.1
I
M437DRAFT_37930
Aureobasidium melanogenum
M437DRAFT_37930
I
M438DRAFT_348081
Aureobasidium pullulans
M438DRAFT_348081
I
MAC_02526
Metarhizium acridum
MAC_02526
I
MAM_01473
Metarhizium album
MAM_01473
I
MANI_005719
Metarhizium anisopliae
MANI_005719
I
MAPG_03268
Magnaporthe poae
MAPG_03268
I
MBM_08363
Marssonina brunnea
MBM_08363
I
MBR_07703
Metarhizium brunneum
MBR_07703
I
MGG_06243
Magnaporthe oryzae
MGG_06243
I
MGU_03974
Metarhizium guizhouense
MGU_03974
I
MGYG_01049
Microsporum gypseum
MGYG_01049
I
MPH_05371
Macrophomina phaseolina
MPH_05371
I
MYCFIDRAFT_85869
Pseudocercospora fijiensis
MYCFIDRAFT_85869
I
Mycgr3G66346
Zymoseptoria tritici
Mycgr3G66346
I
MYCTH_2303722
Myceliophthora thermophila
MYCTH_2303722
I
NechaG47027
Fusarium solani
NechaG47027
I
NEUTE1DRAFT_121878
Neurospora tetrasperma
NEUTE1DRAFT_121878
I
OCS_03334
Ophiocordyceps sinensis
OCS_03334
I
OIDMADRAFT_114154
Oidiodendron maius
OIDMADRAFT_114154
I
PAAG_01797
Paracoccidioides sp lutzii
PAAG_01797
I
PABG_02082
Paracoccidioides brasiliensis
PABG_02082
I
PCH_Pc18g01980
Penicillium rubens
PCH_Pc18g01980
I
PDE_02741
Penicillium oxalicum
PDE_02741
I
PDIP_73700
Penicillium digitatum
PDIP_73700
I
PEX1_008670
Penicillium expansum
PEX1_008670
I
PFICI_08013
Pestalotiopsis fici
PFICI_08013
I
PITC_028160
Penicillium italicum
PITC_028160
I
PMAA_024490
Talaromyces marneffei
PMAA_024490
I
PTRG_03571
Pyrenophora triticirepentis
PTRG_03571
I
PTT_11354
Pyrenophora teres
PTT_11354
I
PV04_02012
Capronia semiimmersa
PV04_02012
I
PV05_10908
Exophiala xenobiotica
PV05_10908
I
PV06_03662
Exophiala oligosperma
PV06_03662
I
PV07_10763
Cladophialophora immunda
PV07_10763
I
PV08_06071
Exophiala spinifera
PV08_06071
I
PV09_07370
Verruconis gallopava
PV09_07370
I
PV10_09032
Exophiala mesophila
PV10_09032
I
PV11_07852
Exophiala sideris
PV11_07852
I
PVAR5_7982
Byssochlamys spectabilis
PVAR5_7982
I
S40285_00187
Stachybotrys chlorohalonata
S40285_00187
I
S40288_09249
Stachybotrys chartarum
S40288_09249
I
SAPIO_CDS5674
Scedosporium apiospermum
SAPIO_CDS5674
I
SEPMUDRAFT_146085
Sphaerulina musiva
SEPMUDRAFT_146085
I
SETTUDRAFT_160349
Setosphaeria turcica
SETTUDRAFT_160349
I
SMAC_02170
Sordaria macrospora
SMAC_02170
I
SNOG_01260
Phaeosphaeria nodorum
SNOG_01260
I
SPBR_01226
Sporothrix brasiliensis
SPBR_01226
I
TEQG_01439
Trichophyton equinum
TEQG_01439
I
TESG_02341
Trichophyton tonsurans
TESG_02341
I
THITE_60403
Thielavia terrestris
THITE_60403
I
TRIATDRAFT_219427
Trichoderma atroviride
TRIATDRAFT_219427
I
TRIREDRAFT_80668
Trichoderma reesei
TRIREDRAFT_80668
I
TRIVIDRAFT_43951
Trichoderma virens
TRIVIDRAFT_43951
I
TRV_01211
Trichophyton verrucosum
TRV_01211
I
TSTA_033010
Talaromyces stipitatus
TSTA_033010
I
U727_00431294321
Penicillium solitum
U727_00431294321
I
UCRNP2_4046
Neofusicoccum parvum
UCRNP2_4046
I
UREG_02076
Uncinocarpus reesii
UREG_02076
I
UV8b_1298
Ustilaginoidea virens
UV8b_1298
I
V499_09234
Pseudogymnoascus pannorum
V499_09234
I
VDAG_05809
Verticillium dahliae
VDAG_05809
I
VDBG_06746
Verticillium alfalfae
VDBG_06746
I
VHEMI08815
Torrubiella hemipterigena
VHEMI08815
I
W97_08594
Coniosporium apollinis
W97_08594
I
X797_003181
Metarhizium robertsii
X797_003181
I
Z517_08892
Fonsecaea pedrosoi
Z517_08892
I
Z518_07940
Rhinocladiella mackenziei
Z518_07940
I
Z519_03507
Cladophialophora bantiana
Z519_03507
I
e_gw1.10.564.1
Nectria haematococca
e_gw1.10.564.1
I
estExt_fgenesh1_pg.C_10584
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_10584
I
estExt_Genewise1Plus.C_120314
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_120314
I
estExt_Genewise1Plus.C_chr_12147
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_12147
I
scaffold_19-snap.13.1
Neurospora discreta
scaffold_19-snap.13.1
I
AB06017.1
Alternaria brassicicola
AB06017.1
I
estExt_Genewise1Plus.C_11490
Cryphonectria parasitica
estExt_Genewise1Plus.C_11490
I
fgenesh1_pg.00129_#_375
Aspergillus carbonarius
fgenesh1_pg.00129_#_375
I
Pc18g01980
Penicillium chrysogenum
Pc18g01980
I
PMAA_024490
Penicillium marneffei
PMAA_024490
I
Bcin10g04060
Botrytis cinerea
Bcin10g04060
N
SBOR_5824
Sclerotinia borealis
SBOR_5824
N
SS1G_12532
Sclerotinia sclerotiorum
SS1G_12532
N