CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_43.109
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_43.109
T258250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_43.109
MADS box
12
62
RETKEQRAVTFSKRRRGLFNKAAELCVLCDFQVAVLVSSPNPAKLNKFYTF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POU4F2
Homo sapiens
ENSG00000151615
D
POU4F2
Sus scrofa
ENSSSCG00000026015
I
POU4F2
Otolemur garnettii
ENSOGAG00000028626
I
POU4F2
Ochotona princeps
ENSOPRG00000011220
I
ENSPANG00000006551
Papio anubis
ENSPANG00000006551
I
POU4F2
Procavia capensis
ENSPCAG00000002636
I
ENSPPYG00000015107
Pongo abelii
ENSPPYG00000015107
I
ENSPSIG00000001736
Pelodiscus sinensis
ENSPSIG00000001736
I
POU4F2
Pan troglodytes
ENSPTRG00000016492
I
POU4F2
Pteropus vampyrus
ENSPVAG00000011688
I
Pou4f2
Rattus norvegicus
ENSRNOG00000012167
I
POU4F2
Sorex araneus
ENSSARG00000007463
I
ENSSHAG00000013709
Sarcophilus harrisii
ENSSHAG00000013709
I
ENSSSCG00000009034
Sus scrofa
ENSSSCG00000009034
I
POU4F2
Ornithorhynchus anatinus
ENSOANG00000006897
I
ENSSTOG00000021113
Ictidomys tridecemlineatus
ENSSTOG00000021113
I
POU4F2
Vicugna pacos
ENSVPAG00000006925
I
Alligator_sinensis_CCG006380.1
Alligator sinensis
Alligator_sinensis_CCG006380.1
I
Cmyd_10009510
Chelonia mydas
Cmyd_10009510
I
ENSP00000281321-D1
Bos grunniens
ENSP00000281321-D1
I
ENSP00000281321
Macaca fascicularis
ENSP00000281321
I
Myotis_brandtii_POU4F2_10016901
Myotis brandtii
Myotis_brandtii_POU4F2_10016901
I
Ogr03813
Ophisaurus gracilis
Ogr03813
I
Pvit_02490
Pogona vitticeps
Pvit_02490
I
pou4f2
Xenopus tropicalis
XB-GENE-854899
I
ENSLACG00000005883
Latimeria chalumnae
ENSLACG00000005883
I
POU4F2
Bos taurus
ENSBTAG00000005648
I
POU4F2
Canis familiaris
ENSCAFG00000007756
I
POU4F2
Callithrix jacchus
ENSCJAG00000002462
I
POU4F2
Cavia porcellus
ENSCPOG00000013770
I
ENSCSAG00000003411
Chlorocebus sabaeus
ENSCSAG00000003411
I
POU4F2
Dasypus novemcinctus
ENSDNOG00000013134
I
Pou4f2
Dipodomys ordii
ENSDORG00000004448
I
POU4F2
Equus caballus
ENSECAG00000020754
I
POU4F2
Felis catus
ENSFCAG00000003049
I
POU4F2
Gorilla gorilla
ENSGGOG00000001836
I
ENSGMOG00000000453
Gadus morhua
ENSGMOG00000000453
I
ENSAMEG00000016679
Ailuropoda melanoleuca
ENSAMEG00000016679
I
POU4F2
Loxodonta africana
ENSLAFG00000001505
I
ENSLOCG00000008825
Lepisosteus oculatus
ENSLOCG00000008825
I
ENSMEUG00000012973
Macropus eugenii
ENSMEUG00000012973
I
ENSMICG00000000575
Microcebus murinus
ENSMICG00000000575
I
POU4F2
Myotis lucifugus
ENSMLUG00000015174
I
POU4F2
Macaca mulatta
ENSMMUG00000023440
I
POU4F2
Monodelphis domestica
ENSMODG00000000557
I
ENSMPUG00000006963
Mustela putorius furo
ENSMPUG00000006963
I
Pou4f2
Mus musculus
ENSMUSG00000031688
I
ENSNLEG00000005619
Nomascus leucogenys
ENSNLEG00000005619
I