CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_43.109
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_43.109
T258250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_43.109
MADS box
12
62
RETKEQRAVTFSKRRRGLFNKAAELCVLCDFQVAVLVSSPNPAKLNKFYTF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF205
Homo sapiens
ENSG00000122386
D
ENSCSAG00000010150
Chlorocebus sabaeus
ENSCSAG00000010150
I
ZNF205
Gorilla gorilla
ENSGGOG00000012036
I
ZNF205
Macaca mulatta
ENSMMUG00000009487
I
ENSNLEG00000009600
Nomascus leucogenys
ENSNLEG00000009600
I
ENSPANG00000024398
Papio anubis
ENSPANG00000024398
I
ENSPPYG00000007034
Pongo abelii
ENSPPYG00000007034
I
ZNF205
Pan troglodytes
ENSPTRG00000007686
I