Thhalv10022126m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10022126m.g T259173_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL103
M10918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G18650_01 		0.739 0.739
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10022126m MADS box 34 79

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA020378 Oryza indica BGIOSGA020378 N 0.000
GRMZM2G117497 Zea mays GRMZM2G117497 N 0.000
OB05G33630 Oryza brachyantha OB05G33630 N 0.000
OBART05G26130 Oryza barthii OBART05G26130 N 0.000
OGLUM05G27750 Oryza glumaepatula OGLUM05G27750 N 0.000
OMERI03G30200 Oryza meridionalis OMERI03G30200 N 0.000
OPUNC05G23730 Oryza punctata OPUNC05G23730 N 0.000
ORGLA05G0226000 Oryza glaberrima ORGLA05G0226000 N 0.000
ORUFI05G28020 Oryza rufipogon ORUFI05G28020 N 0.000
OS05G0567600 Oryza sativa OS05G0567600 N 0.000
Sb09g028790 Sorghum bicolor Sb09g028790 N 0.000
Si024486m.g Setaria italica Si024486m.g N 0.000
Pavir.Ca00951 Panicum virgatum Pavir.Ca00951 N 0.000
Pavir.J09915 Panicum virgatum Pavir.J09915 N 0.000