Pavir.Ca00951 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ca00951 T289059_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca00951.1.p Myb 12 62

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J09915 Panicum virgatum Pavir.J09915 N 0.909
Pavir.J28254 Panicum virgatum Pavir.J28254 N 0.898
Si024486m.g Setaria italica Si024486m.g N 0.822
OB05G33630 Oryza brachyantha OB05G33630 N 0.737
BRADI2G16120 Brachypodium distachyon BRADI2G16120 N 0.713
Sb09g028790 Sorghum bicolor Sb09g028790 N 0.706
GRMZM2G117497 Zea mays GRMZM2G117497 N 0.698
MLOC_53626 Hordeum vulgare MLOC_53626 N 0.684
Traes_1BL_5E492444E Triticum aestivum Traes_1BL_5E492444E N 0.683
F775_15026 Aegilops tauschii F775_15026 N 0.676
Traes_1BL_B30884E0E Triticum aestivum Traes_1BL_B30884E0E N 0.676
Traes_1DL_10172C13A Triticum aestivum Traes_1DL_10172C13A N 0.676
F775_15149 Aegilops tauschii F775_15149 N 0.663
BGIOSGA020378 Oryza indica BGIOSGA020378 N 0.661
OBART05G26130 Oryza barthii OBART05G26130 N 0.661
OGLUM05G27750 Oryza glumaepatula OGLUM05G27750 N 0.661
OMERI03G30200 Oryza meridionalis OMERI03G30200 N 0.661
OMERI05G22790 Oryza meridionalis OMERI05G22790 N 0.661
OPUNC05G23730 Oryza punctata OPUNC05G23730 N 0.661
ORGLA05G0226000 Oryza glaberrima ORGLA05G0226000 N 0.661
ORUFI05G28020 Oryza rufipogon ORUFI05G28020 N 0.661
OS05G0567600 Oryza sativa OS05G0567600 N 0.661