CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr5.LjT39E05.40.nd
(
Lotus japonicus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
chr5.LjT39E05.40.nd
T259344_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr5.LjT39E05.40.nd
MADS box
21
68
RITNESHLQVTFSKRRTGLFKKASELCTLCGAELALIVFSPGGKAFSF
Links
Other
MADS box
family TFs
Other
Lotus japonicus
TFs
245 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0008s05200
Populus trichocarpa
POPTR_0008s05200
N
SapurV1A.0038s0820
Salix purpurea
SapurV1A.0038s0820
N