ACHR006794 (Anopheles christyi)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 ACHR006794 T259475_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		0.733 0.733
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		0.733 0.733
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.700 0.700
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.700 0.700
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.700 0.700
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.700 0.700
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.700 0.700
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.700 0.700
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.700 0.700
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.700 0.700
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.700 0.700
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.700 0.700
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.700 0.700
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.700 0.700
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.700 0.700
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.700 0.700
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.700 0.700
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.700 0.700
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.700 0.700
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.700 0.700
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.700 0.700
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.700 0.700
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.700 0.700
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.700 0.700
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACHR006794-PA MADS box 155 184

Links

Other MADS box family TFs
Other Anopheles christyi TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAC_07447 Sordaria macrospora SMAC_07447 N
NechaG74381 Fusarium solani NechaG74381 N
OIDMADRAFT_74239 Oidiodendron maius OIDMADRAFT_74239 N
PFICI_13726 Pestalotiopsis fici PFICI_13726 N
PODANS_5_4070 Podospora anserina PODANS_5_4070 N
PTRG_10286 Pyrenophora triticirepentis PTRG_10286 N
PTT_13765 Pyrenophora teres PTT_13765 N
PV09_00164 Verruconis gallopava PV09_00164 N
SETTUDRAFT_87447 Setosphaeria turcica SETTUDRAFT_87447 N
MYCFIDRAFT_158158 Pseudocercospora fijiensis MYCFIDRAFT_158158 N
SPBR_06366 Sporothrix brasiliensis SPBR_06366 N
VDAG_01189 Verticillium dahliae VDAG_01189 N
VDBG_03963 Verticillium alfalfae VDBG_03963 N
fgenesh1_pg.sca_8_chr1_1_0000412 Nectria haematococca fgenesh1_pg.sca_8_chr1_1_0000412 N
gw1.2.32.1 Cochliobolus heterostrophus C5 gw1.2.32.1 N
col-25 Neurospora crassa NCU06068 N
AB00088.1 Alternaria brassicicola AB00088.1 N
SNOG_09876 Stagonospora nodorum SNOG_09876 N
HMPREF1624_07083 Sporothrix schenckii HMPREF1624_07083 N
FGRRES_01378 Fusarium graminearum FGRRES_01378 N
FFUJ_01581 Fusarium fujikuroi FFUJ_01581 N
F503_03119 Ophiostoma piceae uamh F503_03119 N
CTHT_0017920 Chaetomium thermophilum CTHT_0017920 N
COCVIDRAFT_32721 Bipolaris victoriae COCVIDRAFT_32721 N
COCSADRAFT_105936 Bipolaris sorokiniana COCSADRAFT_105936 N
COCMIDRAFT_81530 Bipolaris oryzae COCMIDRAFT_81530 N
COCCADRAFT_90976 Bipolaris zeicola COCCADRAFT_90976 N
COCC4DRAFT_87358 Bipolaris maydis COCC4DRAFT_87358 N
CHGG_09798 Chaetomium globosum CHGG_09798 N
CH063_03657 Colletotrichum higginsianum CH063_03657 N
ACRE_028580 Acremonium chrysogenum ACRE_028580 N
A1O9_10082 Exophiala aquamarina A1O9_10082 N
VDBG_03963 Verticillium albo atrum VDBG_03963 N