23812_YCR040W (Saccharomyces paradoxus)
MATalpha_HMGbox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04769 (MATalpha_HMGbox) IPR006856 23812_YCR040W T259818_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MATALPHA1
M08591_2.00 		Saccharomyces cerevisiae
NTTCNTNATTNGNNNNNCAATN
NATTGNNNNNCNAATNANGAAN		 Misc
DeBoer et al.(2011)
YCR040W_1418 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23812_YCR040W MATalpha_HMGbox 47 150

Links

Other MATalpha_HMGbox family TFs
Other Saccharomyces paradoxus TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TIGD1 Homo sapiens ENSG00000221944 D
TIGD1 Canis familiaris ENSCAFG00000032642 I
TIGD1 Callithrix jacchus ENSCJAG00000013785 I
ENSCSAG00000006471 Chlorocebus sabaeus ENSCSAG00000006471 I
TIGD1 Gorilla gorilla ENSGGOG00000016685 I
ENSMICG00000012178 Microcebus murinus ENSMICG00000012178 I
TIGD1 Macaca mulatta ENSMMUG00000022150 I
ENSMPUG00000018790 Mustela putorius furo ENSMPUG00000018790 I
ENSNLEG00000018314 Nomascus leucogenys ENSNLEG00000018314 I
TIGD1 Otolemur garnettii ENSOGAG00000030017 I
TIGD1 Pan troglodytes ENSPTRG00000038833 I
ENSTSYG00000019343 Tarsius syrichta ENSTSYG00000019343 I