23812_YCR040W (Saccharomyces paradoxus)
MATalpha_HMGbox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04769 (MATalpha_HMGbox) IPR006856 23812_YCR040W T259818_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MATALPHA1
M08591_2.00 		Saccharomyces cerevisiae
NTTCNTNATTNGNNNNNCAATN
NATTGNNNNNCNAATNANGAAN		 Misc
DeBoer et al.(2011)
YCR040W_1418 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23812_YCR040W MATalpha_HMGbox 47 150

Links

Other MATalpha_HMGbox family TFs
Other Saccharomyces paradoxus TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
2770_Multiple Saccharomyces paradoxus 2770_Multiple I 1.000
SU7_0315 Saccharomyces arboricola SU7_0315 N 0.824
HMLALPHA1 Saccharomyces cerevisiae YCL066W I 0.720
MATALPHA1 Saccharomyces cerevisiae YCR040W D 0.720