CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Setdb1
(
Rattus norvegicus
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ENSRNOG00000021143
T260408_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SETDB1
M11031_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SETDB1_01
0.987
0.987
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000028709
MBD
606
680
YRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLYLEMFCLDPYVLVDR
ENSRNOP00000073356
MBD
626
700
YRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLYLEMFCLDPYVLVDR
Links
Other
MBD
family TFs
Other
Rattus norvegicus
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LDEC022415
Leptinotarsa decemlineata
LDEC022415
N