CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.001G042900
(
Gossypium raimondii
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Gorai.001G042900
T261512_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.001G042900.1
MBD
1
62
FIPKKGVSPTKHEIIFIAPTGEEISNKRQLEKYLKAHPGGPAVSEFYWGTGETPRRSARISE
Links
Other
MBD
family TFs
Other
Gossypium raimondii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0006s06690
Populus trichocarpa
POPTR_0006s06690
N
0.714
Cucsa.132180
Cucumis sativus
Cucsa.132180
N
0.750
Ciclev10010753m.g
Citrus clementina
Ciclev10010753m.g
N
0.707
evm.TU.supercontig_10.263
Carica papaya
evm.TU.supercontig_10.263
N
0.810
MDP0000462461
Malus domestica
MDP0000462461
N
0.724