POPTR_0006s06690 (Populus trichocarpa)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 POPTR_0006s06690 T260878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s06690.1 MBD 1 56

Links

Other MBD family TFs
Other Populus trichocarpa TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.845
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.821
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.793
MTR_0339s0010 Medicago truncatula MTR_0339s0010 N 0.764
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.763
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.762
Bo8g066360 Brassica oleracea Bo8g066360 N 0.750
Bra016665 Brassica rapa Bra016665 N 0.750
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.737
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.732
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.732
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.726
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.714
Gorai.001G042900 Gossypium raimondii Gorai.001G042900 N 0.714
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.714
MDP0000301302 Malus domestica MDP0000301302 N 0.707