MDP0000301302 (Malus domestica)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 MDP0000301302 T261566_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000301302 MBD 120 177

Links

Other MBD family TFs
Other Malus domestica TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.857
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.793
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.776
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.776
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.776
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.776
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.776
Pm013666 Prunus mume Pm013666 N 0.763
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.763
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.759
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.759
MDP0000462461 Malus domestica MDP0000462461 N 0.759
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.741
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.741
Cucsa.295070 Cucumis sativus Cucsa.295070 N 0.741
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.741
MDP0000152128 Malus domestica MDP0000152128 N 0.741
MDP0000574053 Malus domestica MDP0000574053 N 0.741
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.741
PK04144.1 Cannabis sativa PK04144.1 N 0.741
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.732
Bo8g066360 Brassica oleracea Bo8g066360 N 0.724
Bra016665 Brassica rapa Bra016665 N 0.724
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.724
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.724
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.724
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.724
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.724
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.724
MBD10 Arabidopsis thaliana AT1G15340 N 0.707
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.707
MTR_0339s0010 Medicago truncatula MTR_0339s0010 N 0.707
POPTR_0006s06690 Populus trichocarpa POPTR_0006s06690 N 0.707
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.707
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.707
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.707
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.707
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.703