gene15686-v1.0-hybrid (Fragaria vesca)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 gene15686-v1.0-hybrid T261502_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna15686.1-v1.0-hybrid MBD 6 78

Links

Other MBD family TFs
Other Fragaria vesca TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.905
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.819
Pm013666 Prunus mume Pm013666 N 0.814
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.784
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.781
MDP0000301302 Malus domestica MDP0000301302 N 0.776
MDP0000462461 Malus domestica MDP0000462461 N 0.776
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.770
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.753
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.753
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.743
MDP0000248422 Malus domestica MDP0000248422 N 0.743
PK24888.1 Cannabis sativa PK24888.1 N 0.743
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.740
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.740
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.730
Cla016961 Citrullus lanatus Cla016961 N 0.726
TCM_027169 Theobroma cacao TCM_027169 N 0.722
29841.m002855 Ricinus communis 29841.m002855 N 0.716
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.712
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.712
Cla012423 Citrullus lanatus Cla012423 N 0.712
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.712
Ca_19192 Cicer arietinum Ca_19192 N 0.703
Cla012920 Citrullus lanatus Cla012920 N 0.703
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.703
PK04144.1 Cannabis sativa PK04144.1 N 0.703