Cla012423 (Citrullus lanatus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cla012423 T261247_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla012423 MBD 12 84

Links

Other MBD family TFs
Other Citrullus lanatus TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.295070 Cucumis sativus Cucsa.295070 N 0.890
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.810
MDP0000152128 Malus domestica MDP0000152128 N 0.767
MDP0000574053 Malus domestica MDP0000574053 N 0.767
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.753
PK04144.1 Cannabis sativa PK04144.1 N 0.753
MDP0000375866 Malus domestica MDP0000375866 N 0.743
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.740
Pm027560 Prunus mume Pm027560 N 0.740
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.740
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.732
TCM_038107 Theobroma cacao TCM_038107 N 0.730
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.724
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.716
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.716
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.716
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.712
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.712
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.712
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.712
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.712