POPTR_0018s12980 (Populus trichocarpa)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 POPTR_0018s12980 T260886_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0018s12980.1 MBD 7 64

Links

Other MBD family TFs
Other Populus trichocarpa TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.897
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.879
POPTR_0006s06690 Populus trichocarpa POPTR_0006s06690 N 0.845
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.845
MDP0000152128 Malus domestica MDP0000152128 N 0.845
MDP0000574053 Malus domestica MDP0000574053 N 0.845
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.828
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.828
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.828
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.828
TCM_038107 Theobroma cacao TCM_038107 N 0.810
Pm027560 Prunus mume Pm027560 N 0.810
MDP0000375866 Malus domestica MDP0000375866 N 0.810
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.810
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.793
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.793
PK04144.1 Cannabis sativa PK04144.1 N 0.793
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.776
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.776
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.776
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.776
Ca_06682 Cicer arietinum Ca_06682 N 0.776
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.776
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.759
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.759
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.759
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.759
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.759
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.741
MDP0000248422 Malus domestica MDP0000248422 N 0.741
MDP0000301302 Malus domestica MDP0000301302 N 0.741
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.724
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.724
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.724
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.724
Ca_19192 Cicer arietinum Ca_19192 N 0.724
Cla012423 Citrullus lanatus Cla012423 N 0.724
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.724
MTR_0339s0010 Medicago truncatula MTR_0339s0010 N 0.707
MTR_0339s0020 Medicago truncatula MTR_0339s0020 N 0.707
MTR_4g114785 Medicago truncatula MTR_4g114785 N 0.707
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.707
Cla012920 Citrullus lanatus Cla012920 N 0.707
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.707
Lus10043263.g Linum usitatissimum Lus10043263.g N 0.707