AMTR_s00004p00169140 (Amborella trichopoda)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 AMTR_s00004p00169140 T259878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERM93673 MBD 22 110

Links

Other MBD family TFs
Other Amborella trichopoda TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.822
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.808
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.808
TCM_038107 Theobroma cacao TCM_038107 N 0.808
Pm027560 Prunus mume Pm027560 N 0.808
MDP0000152128 Malus domestica MDP0000152128 N 0.808
MDP0000574053 Malus domestica MDP0000574053 N 0.808
PK04144.1 Cannabis sativa PK04144.1 N 0.808
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.808
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.797
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.795
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.795
Ca_06682 Cicer arietinum Ca_06682 N 0.795
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.795
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.793
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.784
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.781
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.781
MDP0000375866 Malus domestica MDP0000375866 N 0.781
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.776
LPERR12G16300 Leersia perrieri LPERR12G16300 N 0.767
OMERI12G13490 Oryza meridionalis OMERI12G13490 N 0.767
OPUNC12G17310 Oryza punctata OPUNC12G17310 N 0.767
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.767
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.757
BGIOSGA035814 Oryza indica BGIOSGA035814 N 0.753
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.753
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.753
GSMUA_Achr2G12870_001 Musa acuminata GSMUA_Achr2G12870_001 N 0.753
GSMUA_Achr7G01310_001 Musa acuminata GSMUA_Achr7G01310_001 N 0.753
OB12G26010 Oryza brachyantha OB12G26010 N 0.753
OBART12G19140 Oryza barthii OBART12G19140 N 0.753
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N 0.753
ONIVA02G25900 Oryza nivara ONIVA02G25900 N 0.753
ORGLA12G0164400 Oryza glaberrima ORGLA12G0164400 N 0.753
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N 0.753
OS12G0620400 Oryza sativa OS12G0620400 N 0.753
VIT_06s0080g01270 Vitis vinifera VIT_06s0080g01270 N 0.753
Pavir.Ca02859 Panicum virgatum Pavir.Ca02859 N 0.753
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.753
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.753
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.743
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.743
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.740
Ca_19192 Cicer arietinum Ca_19192 N 0.740
Cla012920 Citrullus lanatus Cla012920 N 0.740
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.726
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.726
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.726
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.726
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.726
Pavir.J29994 Panicum virgatum Pavir.J29994 N 0.726
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.725
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.712
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.712
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.712
Cla016961 Citrullus lanatus Cla016961 N 0.712
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.712
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.712
Aquca_009_00660 Aquilegia coerulea Aquca_009_00660 N 0.712
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.712
MDP0000248422 Malus domestica MDP0000248422 N 0.712